RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 WTIPA6NIX2 430 aaPredicted RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 SPDYE3A6NKU9 549 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 TMEM110-MUSTN1A8MSY1 372 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 PLCD1P51178 756 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 SETQ01105 290 aaPredicted RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 WDR78Q5VTH9 848 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 SPATA1Q5VX52 437 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 SLC35F6Q8N357 371 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 RDH13Q8NBN7 331 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 CALCOCO1Q9P1Z2 691 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 SMIM23A6NLE4 172 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 DDX39AO00148 427 aaKnown RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 KRT83P78385 493 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 CYP27A1Q02318 531 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 ARMCX5Q6P1M9 558 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 JAKMIP2Q96AA8 810 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 TTF2Q9UNY4 1162 aaKnown RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 TRIM49BA6NDI0 452 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 B4DLN1 442 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 LIFRP42702 1097 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 CYP26C1Q6V0L0 522 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 DPP8Q6V1X1 898 aaPredicted RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 SPTLC3Q9NUV7 552 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 RPN1P04843 607 aaKnown RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 RNF187Q5TA31 235 aaPredicted RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 TOGARAM2Q6ZUX3 1019 aa18.03■□□□□ 0.48
VARS2-212ENST00000542001 FOXP1Q9H334 677 aaPredicted RBP18.03■□□□□ 0.48
VARS2-212ENST00000542001 KIAA0754O94854 1291 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 UBE4AQ14139 1066 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 CALCRLQ16602 461 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 TBC1D10BQ4KMP7 808 aaPredicted RBP18.02■□□□□ 0.48
VARS2-212ENST00000542001 C10orf67Q8IYJ2 551 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 SMIM22K7EJ46 135 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
VARS2-212ENST00000542001 RNF26Q9BY78 433 aaPredicted RBP18.02■□□□□ 0.48
VARS2-212ENST00000542001 C1orf167Q5SNV9 1468 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 MYO5BQ9ULV0 1848 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 SLC1A4P43007 532 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 CACNB3P54284 484 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.47
VARS2-212ENST00000542001 VPS36Q86VN1 386 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 ST7Q9NRC1 585 aa18.02■□□□□ 0.47
VARS2-212ENST00000542001 ZCCHC17Q9NP64 241 aaKnown RBP18.01■□□□□ 0.47
VARS2-212ENST00000542001 FAM196BA6NMK8 535 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 CYP4A11Q02928 519 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 CUL4BQ13620 913 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 METTL16Q86W50 562 aaKnown RBP18.01■□□□□ 0.47
VARS2-212ENST00000542001 TIGD1Q96MW7 591 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 EPB41L4AQ9HCS5 686 aaPredicted RBP18.01■□□□□ 0.47
VARS2-212ENST00000542001 NCAPD2Q15021 1401 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 BICDL2A1A5D9 508 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 BUB1O43683 1085 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 TMTC1Q8IUR5 882 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 SPICE1Q8N0Z3 855 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 TRIM31Q9BZY9 425 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 MINPP1Q9UNW1 487 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 HPS5Q9UPZ3 1129 aa18.01■□□□□ 0.47
VARS2-212ENST00000542001 MAGEA1P43355 309 aa18■□□□□ 0.47
VARS2-212ENST00000542001 UTP14CQ5TAP6 766 aaKnown RBP18■□□□□ 0.47
VARS2-212ENST00000542001 PAGE5Q96GU1 130 aa18■□□□□ 0.47
VARS2-212ENST00000542001 USP40Q9NVE5 1235 aa18■□□□□ 0.47
VARS2-212ENST00000542001 SLFN14P0C7P3 912 aa18■□□□□ 0.47
VARS2-212ENST00000542001 CDR1P51861 262 aa18■□□□□ 0.47
VARS2-212ENST00000542001 VSTM4Q8IW00 320 aa18■□□□□ 0.47
VARS2-212ENST00000542001 GTPBP4Q9BZE4 634 aaKnown RBP18■□□□□ 0.47
VARS2-212ENST00000542001 MROH7-TTC4A0A0A0MT08 1334 aa18■□□□□ 0.47
VARS2-212ENST00000542001 TECPR2O15040 1411 aa18■□□□□ 0.47
VARS2-212ENST00000542001 COPB1P53618 953 aaKnown RBP18■□□□□ 0.47
VARS2-212ENST00000542001 SNAP25P60880 206 aa18■□□□□ 0.47
VARS2-212ENST00000542001 OR8K1Q8NGG5 319 aa18■□□□□ 0.47
VARS2-212ENST00000542001 ARPP21Q9UBL0 812 aaPredicted RBP18■□□□□ 0.47
VARS2-212ENST00000542001 PTPREP23469 700 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 CXCR5P32302 372 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 SMC1AQ14683 1233 aaKnown RBP17.99■□□□□ 0.47
VARS2-212ENST00000542001 USP21Q9UK80 565 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 KCTD1Q719H9 257 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 CPXCR1Q8N123 301 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 PIGSQ96S52 555 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 IKBKBO14920 756 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 MRPL12P52815 198 aaKnown RBP17.99■□□□□ 0.47
VARS2-212ENST00000542001 FMR1Q06787 632 aaKnown RBP eCLIP17.99■□□□□ 0.47
VARS2-212ENST00000542001 RESP18Q5W5W9 173 aa17.99■□□□□ 0.47
VARS2-212ENST00000542001 ERLIN2O94905 339 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 CFBP00751 764 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 PLCG2P16885 1265 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 GJC1P36383 396 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 CLCN6P51797 869 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 UBXN2AP68543 259 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 IGDCC4Q8TDY8 1250 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 SRPRBQ9Y5M8 271 aaKnown RBP17.98■□□□□ 0.47
VARS2-212ENST00000542001 TLDC2A0PJX2 215 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 ADCY7P51828 1080 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 TBC1D9BQ66K14 1250 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 CLEC10AQ8IUN9 316 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 TXLNBQ8N3L3 684 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 LLGL1Q15334 1064 aa17.98■□□□□ 0.47
VARS2-212ENST00000542001 STAG2Q8N3U4 1231 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms