RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 ERCC3P19447 782 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 NPY5RQ15761 445 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 LETM2Q2VYF4 491 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 WWC2Q6AWC2 1192 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 REM2Q8IYK8 340 aaPredicted RBP7□□□□□ -1.29
NOVA1-206ENST00000539517 TSC1Q92574 1164 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 TMEM260Q9NX78 707 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 CACNA1SQ13698 1873 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 COL5A3P25940 1745 aaPredicted RBP7□□□□□ -1.29
NOVA1-206ENST00000539517 PRPF3O43395 683 aaKnown RBP7□□□□□ -1.29
NOVA1-206ENST00000539517 NAPAP54920 295 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 PPP4CP60510 307 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 SBK1Q52WX2 424 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 METTL16Q86W50 562 aaKnown RBP7□□□□□ -1.29
NOVA1-206ENST00000539517 LARGE2Q8N3Y3 721 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 PHF20Q9BVI0 1012 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 PYCARDQ9ULZ3 195 aa7□□□□□ -1.29
NOVA1-206ENST00000539517 DPEP1P16444 411 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 KIF5BP33176 963 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CCDC144BQ3MJ40 725 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 RILPL1Q5EBL4 403 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 JMYQ8N9B5 988 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TBC1D22AQ8WUA7 517 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 SYMPKQ92797 1274 aaKnown RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 FZD1Q9UP38 647 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 ZKSCAN5Q9Y2L8 839 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 YDJCA8MPS7 323 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 PARP1P09874 1014 aaKnown RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 STX1AQ16623 288 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TTC38Q5R3I4 469 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 PRAMEF18Q5VWM3 479 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TRMT1LQ7Z2T5 733 aaKnown RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CEP57L1Q8IYX8 460 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CAMKK2Q96RR4 588 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TSPYL2Q9H2G4 693 aaPredicted RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 FOXP1Q9H334 677 aaPredicted RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 NOL7Q9UMY1 257 aaKnown RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 BRWD3Q6RI45 1802 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CCDC194A0A1B0GVG4 234 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 FGRP09769 529 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 BMP6P22004 513 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CLCN1P35523 988 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 IQCB1Q15051 598 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 DGKHQ86XP1 1220 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TMEM60Q9H2L4 133 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 BRMS1Q9HCU9 246 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 ANO10Q9NW15 660 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 TRMT1Q9NXH9 659 aaKnown RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 CCDC39Q9UFE4 941 aa6.99□□□□□ -1.29
NOVA1-206ENST00000539517 FBXO2Q9UK22 296 aaPredicted RBP6.99□□□□□ -1.29
NOVA1-206ENST00000539517 KLRG2A4D1S0 409 aaPredicted RBP6.98□□□□□ -1.29
NOVA1-206ENST00000539517 SMCO2A6NFE2 343 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 SEPT2Q15019 361 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 KARSQ15046 597 aaKnown RBP6.98□□□□□ -1.29
NOVA1-206ENST00000539517 UBE2SQ16763 222 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 SLC30A10Q6XR72 485 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 DHX40Q8IX18 779 aaKnown RBP6.98□□□□□ -1.29
NOVA1-206ENST00000539517 TRIM34Q9BYJ4 488 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 IFNKQ9P0W0 207 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 CHD4Q14839 1912 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 A0A1W2PQ27 194 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 A0A1W2PQ64 194 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 A0A1W2PQD8 194 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 DDAH1O94760 285 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 CALM1P0DP23 149 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 CALM2P0DP24 149 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 CALM3P0DP25 149 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 PTPREP23469 700 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 JAG1P78504 1218 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 PFKFB3Q16875 520 aaPredicted RBP6.98□□□□□ -1.29
NOVA1-206ENST00000539517 USH1GQ495M9 461 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 C16orf86Q6ZW13 317 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 BLIDQ8IZY5 108 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 KCNF1Q9H3M0 494 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 POLD4Q9HCU8 107 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 RBM28Q9NW13 759 aaKnown RBP6.98□□□□□ -1.29
NOVA1-206ENST00000539517 BRCA2P51587 3418 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 PLCG2P16885 1265 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 KIAA2012Q0VF49 1180 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 KRBA2Q6ZNG9 492 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 DNAJC18Q9H819 358 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 FANCLQ9NW38 375 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 MTMR4Q9NYA4 1195 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 FAM13BQ9NYF5 915 aa6.98□□□□□ -1.29
NOVA1-206ENST00000539517 C4AP0C0L4 1744 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 CCNT1O60563 726 aaKnown RBP6.97□□□□□ -1.29
NOVA1-206ENST00000539517 EGFRP00533 1210 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 IL17AQ16552 155 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 CFAP100Q494V2 611 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 RESP18Q5W5W9 173 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 ATL3Q6DD88 541 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 SH3BP5LQ7L8J4 393 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 PODNQ7Z5L7 613 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 SLF2Q8IX21 1173 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 OSBPL5Q9H0X9 879 aaPredicted RBP6.97□□□□□ -1.29
NOVA1-206ENST00000539517 BCS1LQ9Y276 419 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
NOVA1-206ENST00000539517 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms