RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PARP14Q460N5 1801 aa15.03■□□□□ -0
VAMP1-206ENST00000538970 CNGA1P29973 690 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 PLS1Q14651 629 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 ABRAQ8N0Z2 381 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 KBTBD3Q8NAB2 608 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 STRBPQ96SI9 672 aaKnown RBP15.02■□□□□ -0
VAMP1-206ENST00000538970 DCTPP1Q9H773 170 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 KANSL2Q9H9L4 492 aa15.02■□□□□ -0
VAMP1-206ENST00000538970 GREB1LQ9C091 1923 aaPredicted RBP15.02□□□□□ -0.01
VAMP1-206ENST00000538970 ROBO3Q96MS0 1386 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 POTEB2H3BUK9 544 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 COBLO75128 1261 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 TMEM132BQ14DG7 1078 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 SBK1Q52WX2 424 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 TSHZ3Q63HK5 1081 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 NCAPG2Q86XI2 1143 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 GPATCH3Q96I76 525 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.01□□□□□ -0.01
VAMP1-206ENST00000538970 ADAMTS5Q9UNA0 930 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 PRUNE2Q8WUY3 3088 aa15.01□□□□□ -0.01
VAMP1-206ENST00000538970 GSG1L2A8MUP6 293 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 DNM1LO00429 736 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 GIMAP6Q6P9H5 292 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 SAMD1Q6SPF0 538 aaPredicted RBP15□□□□□ -0.01
VAMP1-206ENST00000538970 APPBP2Q92624 585 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 OSBP2Q969R2 916 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
VAMP1-206ENST00000538970 GOPCQ9HD26 462 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 FBXO28Q9NVF7 368 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 SLC5A4Q9NY91 659 aa15□□□□□ -0.01
VAMP1-206ENST00000538970 RNF113AO15541 343 aaKnown RBP14.99□□□□□ -0.01
VAMP1-206ENST00000538970 SLC25A27O95847 323 aa14.99□□□□□ -0.01
VAMP1-206ENST00000538970 RASA1P20936 1047 aa14.99□□□□□ -0.01
VAMP1-206ENST00000538970 MAML3Q96JK9 1138 aa14.99□□□□□ -0.01
VAMP1-206ENST00000538970 EPB41L4AQ9HCS5 686 aaPredicted RBP14.99□□□□□ -0.01
VAMP1-206ENST00000538970 RAPGEFL1Q9UHV5 662 aa14.99□□□□□ -0.01
VAMP1-206ENST00000538970 PPP1R9AQ9ULJ8 1098 aa14.99□□□□□ -0.01
VAMP1-206ENST00000538970 VWA5AO00534 786 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 SEPT4O43236 478 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 ZFYP08048 801 aaPredicted RBP14.98□□□□□ -0.01
VAMP1-206ENST00000538970 FCER1AP12319 257 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 MDM2Q00987 491 aaPredicted RBP14.98□□□□□ -0.01
VAMP1-206ENST00000538970 FAM83BQ5T0W9 1011 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 RIOX2Q8IUF8 465 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 REPS2Q8NFH8 660 aa14.98□□□□□ -0.01
VAMP1-206ENST00000538970 ZNF214Q9UL59 606 aaPredicted RBP14.98□□□□□ -0.01
VAMP1-206ENST00000538970 MINDY4BA8MYZ0 360 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 M0R2C6 588 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 GPAA1O43292 621 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 RAD21O60216 631 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
VAMP1-206ENST00000538970 GJC2Q5T442 439 aaPredicted RBP14.97□□□□□ -0.01
VAMP1-206ENST00000538970 STK11IPQ8N1F8 1099 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 MMP19Q99542 508 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 NYAP2Q9P242 653 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 MUC3AQ02505 3323 aa14.97□□□□□ -0.01
VAMP1-206ENST00000538970 COL11A1P12107 1806 aaPredicted RBP14.96□□□□□ -0.01
VAMP1-206ENST00000538970 TTC41PQ6P2S7 1318 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 IGKV6D-41A0A0C4DH26 115 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 GNAT2P19087 354 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 COL9A1P20849 921 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 COPB2P35606 906 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 STAT3P40763 770 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 TDO2P48775 406 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 KCTD2Q14681 263 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 PRAMEF19Q5SWL8 479 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 ANO1Q5XXA6 986 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 FAM109BQ6ICB4 259 aaPredicted RBP14.96□□□□□ -0.01
VAMP1-206ENST00000538970 ARRDC4Q8NCT1 418 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 NUP88Q99567 741 aaPredicted RBP14.96□□□□□ -0.01
VAMP1-206ENST00000538970 MKNK2Q9HBH9 465 aa14.96□□□□□ -0.01
VAMP1-206ENST00000538970 KBTBD13C9JR72 458 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 F5H6K3 240 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 NDUFB10O96000 172 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 PGK2P07205 417 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 RTP1P59025 263 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 KLRC3Q07444 240 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 FAM47AQ5JRC9 791 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 PI4K2BQ8TCG2 481 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 SLF1Q9BQI6 1058 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 NRBP1Q9UHY1 535 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 PCDHB15Q9Y5E8 787 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 CDH23Q9H251 3354 aa14.95□□□□□ -0.02
VAMP1-206ENST00000538970 PRDM1O75626 825 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 SNX17Q15036 470 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 LRRFIP1Q32MZ4 808 aaKnown RBP14.94□□□□□ -0.02
VAMP1-206ENST00000538970 ZNF792Q3KQV3 632 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 IFNL3Q8IZI9 196 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 MAFAQ8NHW3 353 aaPredicted RBP14.94□□□□□ -0.02
VAMP1-206ENST00000538970 OTUD7AQ8TE49 926 aaPredicted RBP14.94□□□□□ -0.02
VAMP1-206ENST00000538970 CDX2Q99626 313 aaPredicted RBP14.94□□□□□ -0.02
VAMP1-206ENST00000538970 TINF2Q9BSI4 451 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 TEX13BQ9BXU2 312 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 DIS3Q9Y2L1 958 aaKnown RBP14.94□□□□□ -0.02
VAMP1-206ENST00000538970 PLIN4Q96Q06 1357 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 LTBP2Q14767 1821 aa14.94□□□□□ -0.02
VAMP1-206ENST00000538970 PATL2C9JE40 543 aaKnown RBP14.93□□□□□ -0.02
VAMP1-206ENST00000538970 ERC2O15083 957 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 APPP05067 770 aa14.93□□□□□ -0.02
VAMP1-206ENST00000538970 LRRC41Q15345 812 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms