RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 B4E1Z4 1266 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 PDIA3P30101 505 aaKnown RBP8.78□□□□□ -1
C2CD3-212ENST00000538625 USP5P45974 858 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 RCAN1P53805 252 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 PABPC4Q13310 644 aaKnown RBP eCLIP8.78□□□□□ -1
C2CD3-212ENST00000538625 CCDC84Q86UT8 332 aaPredicted RBP8.78□□□□□ -1
C2CD3-212ENST00000538625 CCDC83Q8IWF9 413 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 ANKRD13CQ8N6S4 541 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 ZNF280CQ8ND82 737 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 PXYLP1Q8TE99 480 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 U2AF1L4Q8WU68 220 aaKnown RBP8.78□□□□□ -1
C2CD3-212ENST00000538625 ESR2Q92731 530 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 SHISA4Q96DD7 197 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 LLPHQ9BRT6 129 aaKnown RBP8.78□□□□□ -1
C2CD3-212ENST00000538625 LRRC2Q9BYS8 371 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 ZSWIM5Q9P217 1185 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.78□□□□□ -1
C2CD3-212ENST00000538625 PI4KBQ9UBF8 816 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 TAOK2Q9UL54 1235 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 NR2E3Q9Y5X4 410 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 FLT1P17948 1338 aa8.78□□□□□ -1
C2CD3-212ENST00000538625 DDX60LQ5H9U9 1706 aaKnown RBP8.77□□□□□ -1
C2CD3-212ENST00000538625 MGAMO43451 1857 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 DOCK3Q8IZD9 2030 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 CYP2D7A0A087X1C5 515 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 USP17L5A8MUK1 530 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 MINDY4BA8MYZ0 360 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 KDM4AO75164 1064 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 FARP2O94887 1054 aaPredicted RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 SGPL1O95470 568 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 BRD1O95696 1058 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 TFRCP02786 760 aaKnown RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 SLC3A2P08195 630 aaKnown RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 ELNP15502 786 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 CAPN2P17655 700 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 CAP2P40123 477 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 GCLCP48506 637 aaPredicted RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 FXR1P51114 621 aaKnown RBP eCLIP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 FGD1P98174 961 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 APOBRQ0VD83 1088 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 IRF5Q13568 498 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 TREML2Q5T2D2 321 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 CHST3Q7LGC8 479 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 TMTC2Q8N394 836 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 PROCA1Q8NCQ7 364 aaPredicted RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 SMARCC2Q8TAQ2 1214 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 TGFBRAP1Q8WUH2 860 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 TRIM34Q9BYJ4 488 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 UNC93B1Q9H1C4 597 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 DHX36Q9H2U1 1008 aaKnown RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 LY9Q9HBG7 655 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 AS3MTQ9HBK9 375 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 INCENPQ9NQS7 918 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 GPHNQ9NQX3 736 aaPredicted RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 MCM9Q9NXL9 1143 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 HERC5Q9UII4 1024 aaKnown RBP8.77□□□□□ -1.01
C2CD3-212ENST00000538625 DOCK1Q14185 1865 aa8.77□□□□□ -1.01
C2CD3-212ENST00000538625 PTPRFP10586 1907 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 SMIM22K7EJ46 135 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 INHAP05111 366 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 ASNSP08243 561 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 CYP2D6P10635 497 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 HMGCS2P54868 508 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 PDE4BQ07343 736 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 SCRN1Q12765 414 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 SART3Q15020 963 aaKnown RBP8.76□□□□□ -1.01
C2CD3-212ENST00000538625 SEC23AQ15436 765 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 FAM110CQ1W6H9 321 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 APOA5Q6Q788 366 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 C16orf86Q6ZW13 317 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 FOXP4Q8IVH2 680 aaPredicted RBP8.76□□□□□ -1.01
C2CD3-212ENST00000538625 AMOTL1Q8IY63 956 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 CRACR2BQ8N4Y2 399 aaPredicted RBP8.76□□□□□ -1.01
C2CD3-212ENST00000538625 NECAB1Q8N987 351 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 RGS22Q8NE09 1264 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 DEFB118Q96PH6 123 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 TCP11L1Q9NUJ3 509 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 TMOD4Q9NZQ9 345 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 BRPF3Q9ULD4 1205 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 SMC3Q9UQE7 1217 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 ZDHHC9Q9Y397 364 aa8.76□□□□□ -1.01
C2CD3-212ENST00000538625 COL2A1P02458 1487 aaPredicted RBP8.76□□□□□ -1.01
C2CD3-212ENST00000538625 KLF18A0A0U1RQI7 1052 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 IFIT3O14879 490 aaKnown RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 CTDNEP1O95476 244 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 GJB2P29033 226 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 PLCD1P51178 756 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 IRX3P78415 501 aaPredicted RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 HMGN5P82970 282 aaKnown RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 GABPAQ06546 454 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 PKP1Q13835 747 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 TMEM67Q5HYA8 995 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 UBE2Q1Q7Z7E8 422 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 MAPKAPK5Q8IW41 473 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 NSUN7Q8NE18 718 aaKnown RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 SP7Q8TDD2 431 aaPredicted RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 ANKS1AQ92625 1134 aa8.75□□□□□ -1.01
C2CD3-212ENST00000538625 TNPO1Q92973 898 aaKnown RBP8.75□□□□□ -1.01
C2CD3-212ENST00000538625 WDR18Q9BV38 432 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms