RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-233ENST00000534636 ROBO3Q96MS0 1386 aa22.09■■□□□ 1.13
CTSB-233ENST00000534636 TTC41PQ6P2S7 1318 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 GPAA1O43292 621 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 APPP05067 770 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 FCER1AP12319 257 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 CYBAP13498 195 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 SYN1P17600 705 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 OSBP2Q969R2 916 aa22.08■■□□□ 1.13
CTSB-233ENST00000534636 ZBTB47Q9UFB7 747 aaPredicted RBP22.08■■□□□ 1.13
CTSB-233ENST00000534636 GSG1L2A8MUP6 293 aa22.07■■□□□ 1.12
CTSB-233ENST00000534636 BMP8BP34820 402 aa22.07■■□□□ 1.12
CTSB-233ENST00000534636 STK11IPQ8N1F8 1099 aa22.07■■□□□ 1.12
CTSB-233ENST00000534636 GDF15Q99988 308 aa22.07■■□□□ 1.12
CTSB-233ENST00000534636 DNM1LO00429 736 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 COPB2P35606 906 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 TMEM132BQ14DG7 1078 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 FAM83BQ5T0W9 1011 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 NACAP1Q9BZK3 213 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 SENP6Q9GZR1 1112 aaPredicted RBP22.06■■□□□ 1.12
CTSB-233ENST00000534636 PPP1R9AQ9ULJ8 1098 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 PLXNA1Q9UIW2 1896 aa22.06■■□□□ 1.12
CTSB-233ENST00000534636 COBLO75128 1261 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 RASA1P20936 1047 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 MAGEA10P43363 369 aaPredicted RBP22.05■■□□□ 1.12
CTSB-233ENST00000534636 LRRC26Q2I0M4 334 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 MMP19Q99542 508 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 FSD1Q9BTV5 496 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 FBXO28Q9NVF7 368 aa22.05■■□□□ 1.12
CTSB-233ENST00000534636 KBTBD13C9JR72 458 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 M0R2C6 588 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 VWA5AO00534 786 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 KCTD2Q14681 263 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 RIOX2Q8IUF8 465 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 ZNF444Q8N0Y2 327 aaPredicted RBP22.04■■□□□ 1.12
CTSB-233ENST00000534636 ARRDC4Q8NCT1 418 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 TRPV1Q8NER1 839 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 SLF1Q9BQI6 1058 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 EPB41L4AQ9HCS5 686 aaPredicted RBP22.04■■□□□ 1.12
CTSB-233ENST00000534636 NYAP2Q9P242 653 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 ADAMTS5Q9UNA0 930 aa22.04■■□□□ 1.12
CTSB-233ENST00000534636 SEPT4O43236 478 aa22.03■■□□□ 1.12
CTSB-233ENST00000534636 SLC3A2P08195 630 aaKnown RBP22.03■■□□□ 1.12
CTSB-233ENST00000534636 STAT3P40763 770 aa22.03■■□□□ 1.12
CTSB-233ENST00000534636 MAML3Q96JK9 1138 aa22.03■■□□□ 1.12
CTSB-233ENST00000534636 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.03■■□□□ 1.12
CTSB-233ENST00000534636 CTDP1Q9Y5B0 961 aaPredicted RBP22.03■■□□□ 1.12
CTSB-233ENST00000534636 PATL2C9JE40 543 aaKnown RBP22.02■■□□□ 1.12
CTSB-233ENST00000534636 IGHA2P01877 340 aa22.02■■□□□ 1.12
CTSB-233ENST00000534636 MYCNP04198 464 aaPredicted RBP22.02■■□□□ 1.12
CTSB-233ENST00000534636 MX1P20591 662 aa22.02■■□□□ 1.12
CTSB-233ENST00000534636 UBE2OQ9C0C9 1292 aaKnown RBP22.02■■□□□ 1.12
CTSB-233ENST00000534636 PCDHB15Q9Y5E8 787 aa22.02■■□□□ 1.12
CTSB-233ENST00000534636 RRP1P56182 461 aaKnown RBP22.01■■□□□ 1.11
CTSB-233ENST00000534636 PDE4BQ07343 736 aa22.01■■□□□ 1.11
CTSB-233ENST00000534636 TDHQ8IZJ6 230 aa22.01■■□□□ 1.11
CTSB-233ENST00000534636 PI4K2BQ8TCG2 481 aa22.01■■□□□ 1.11
CTSB-233ENST00000534636 NAPBQ9H115 298 aa22.01■■□□□ 1.11
CTSB-233ENST00000534636 PRKAG2Q9UGJ0 569 aa22.01■■□□□ 1.11
CTSB-233ENST00000534636 F5H6K3 240 aa22■■□□□ 1.11
CTSB-233ENST00000534636 PRDM1O75626 825 aa22■■□□□ 1.11
CTSB-233ENST00000534636 NDUFB10O96000 172 aa22■■□□□ 1.11
CTSB-233ENST00000534636 ATN1P54259 1190 aaPredicted RBP22■■□□□ 1.11
CTSB-233ENST00000534636 KLRC3Q07444 240 aa22■■□□□ 1.11
CTSB-233ENST00000534636 GJC2Q5T442 439 aaPredicted RBP22■■□□□ 1.11
CTSB-233ENST00000534636 ANO1Q5XXA6 986 aa22■■□□□ 1.11
CTSB-233ENST00000534636 IFNL3Q8IZI9 196 aa22■■□□□ 1.11
CTSB-233ENST00000534636 NUP88Q99567 741 aaPredicted RBP22■■□□□ 1.11
CTSB-233ENST00000534636 TEX13BQ9BXU2 312 aa22■■□□□ 1.11
CTSB-233ENST00000534636 CLIP2Q9UDT6 1046 aa22■■□□□ 1.11
CTSB-233ENST00000534636 NRBP1Q9UHY1 535 aa22■■□□□ 1.11
CTSB-233ENST00000534636 ZNF214Q9UL59 606 aaPredicted RBP22■■□□□ 1.11
CTSB-233ENST00000534636 SOX1O00570 391 aaPredicted RBP21.99■■□□□ 1.11
CTSB-233ENST00000534636 TSPY3P0CV98 308 aa21.99■■□□□ 1.11
CTSB-233ENST00000534636 TSPY8P0CW00 308 aa21.99■■□□□ 1.11
CTSB-233ENST00000534636 SNRNP48Q6IEG0 339 aaKnown RBP21.99■■□□□ 1.11
CTSB-233ENST00000534636 PRPF38AQ8NAV1 312 aaKnown RBP21.99■■□□□ 1.11
CTSB-233ENST00000534636 LRCH3Q96II8 777 aa21.99■■□□□ 1.11
CTSB-233ENST00000534636 LBHD1Q9BQE6 289 aaPredicted RBP21.99■■□□□ 1.11
CTSB-233ENST00000534636 SYNPO2Q9UMS6 1093 aa21.99■■□□□ 1.11
CTSB-233ENST00000534636 DIS3Q9Y2L1 958 aaKnown RBP21.99■■□□□ 1.11
CTSB-233ENST00000534636 SMCHD1A6NHR9 2005 aa21.99■■□□□ 1.11
CTSB-233ENST00000534636 TTLL1O95922 423 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 PGK2P07205 417 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 RARBP10826 455 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 MDM2Q00987 491 aaPredicted RBP21.98■■□□□ 1.11
CTSB-233ENST00000534636 REPS2Q8NFH8 660 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
CTSB-233ENST00000534636 CEP95Q96GE4 821 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 PLIN4Q96Q06 1357 aa21.98■■□□□ 1.11
CTSB-233ENST00000534636 IGKV6D-41A0A0C4DH26 115 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 ZBED4O75132 1171 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 RTP1P59025 263 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 PRAMEF19Q5SWL8 479 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 SEC62Q99442 399 aaKnown RBP21.97■■□□□ 1.11
CTSB-233ENST00000534636 TINF2Q9BSI4 451 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 MTMR4Q9NYA4 1195 aa21.97■■□□□ 1.11
CTSB-233ENST00000534636 ISY1Q9ULR0 285 aaKnown RBP21.97■■□□□ 1.11
CTSB-233ENST00000534636 PPARAQ07869 468 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 LRIT3Q3SXY7 679 aa21.96■■□□□ 1.11
CTSB-233ENST00000534636 PPP4R3BQ5MIZ7 849 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms