RNA–Protein interactions for RNA: ENST00000533543.5

ZNF250-209, Transcript of zinc finger protein 250, humanhuman

TSL 4

Gene ZNF250, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF250-209ENST00000533543 PPARAQ07869 468 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 VPS53Q5VIR6 699 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 CCAR1Q8IX12 1150 aaKnown RBP11.09□□□□□ -0.63
ZNF250-209ENST00000533543 PXYLP1Q8TE99 480 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 LPAR1Q92633 364 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 ZFP91Q96JP5 570 aaPredicted RBP11.09□□□□□ -0.63
ZNF250-209ENST00000533543 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 BTBD7Q9P203 1132 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 MYH8P13535 1937 aa11.09□□□□□ -0.63
ZNF250-209ENST00000533543 RAD21O60216 631 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 FLOT1O75955 427 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 CYP2B6P20813 491 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 MAPK4P31152 587 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 NMIQ13287 307 aaPredicted RBP11.08□□□□□ -0.64
ZNF250-209ENST00000533543 COG2Q14746 738 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 LBX2Q6XYB7 198 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 GPR142Q7Z601 462 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 PLEKHH3Q7Z736 793 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 ZNF444Q8N0Y2 327 aaPredicted RBP11.08□□□□□ -0.64
ZNF250-209ENST00000533543 PDCD7Q8N8D1 485 aaKnown RBP11.08□□□□□ -0.64
ZNF250-209ENST00000533543 RNF208Q9H0X6 261 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 UNC93B1Q9H1C4 597 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 OSBPL3Q9H4L5 887 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
ZNF250-209ENST00000533543 CWC22Q9HCG8 908 aaKnown RBP11.08□□□□□ -0.64
ZNF250-209ENST00000533543 IGKV6D-41A0A0C4DH26 115 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 WDR46O15213 610 aaKnown RBP11.07□□□□□ -0.64
ZNF250-209ENST00000533543 SLC3A2P08195 630 aaKnown RBP11.07□□□□□ -0.64
ZNF250-209ENST00000533543 PDE4AP27815 886 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 CCNA1P78396 465 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 CTDSPL2Q05D32 466 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 PDE4BQ07343 736 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 MCMDC2Q4G0Z9 681 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 WDR78Q5VTH9 848 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 ZNF589Q86UQ0 364 aaPredicted RBP11.07□□□□□ -0.64
ZNF250-209ENST00000533543 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 SHISA4Q96DD7 197 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 ATG4CQ96DT6 458 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 NUDT12Q9BQG2 462 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 GOPCQ9HD26 462 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 HOXC10Q9NYD6 342 aa11.07□□□□□ -0.64
ZNF250-209ENST00000533543 TNRC18O15417 2968 aaPredicted RBP11.07□□□□□ -0.64
ZNF250-209ENST00000533543 RBBP6Q7Z6E9 1792 aaKnown RBP11.06□□□□□ -0.64
ZNF250-209ENST00000533543 HMGCRP04035 888 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 GJB1P08034 283 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 SDSP20132 328 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 TRIM32Q13049 653 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 FAM47AQ5JRC9 791 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 MORN1Q5T089 497 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 FAM83BQ5T0W9 1011 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 TICAM2Q86XR7 235 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 TRIB2Q92519 343 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 CEP95Q96GE4 821 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 NUP88Q99567 741 aaPredicted RBP11.06□□□□□ -0.64
ZNF250-209ENST00000533543 INCENPQ9NQS7 918 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 FBXO28Q9NVF7 368 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 NYAP2Q9P242 653 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 CCDC171Q6TFL3 1326 aa11.06□□□□□ -0.64
ZNF250-209ENST00000533543 GREB1LQ9C091 1923 aaPredicted RBP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 NDUFB10O96000 172 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 TSPY3P0CV98 308 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 TSPY8P0CW00 308 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 HSPD1P10809 573 aaKnown RBP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 RGS2P41220 211 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 GJA8P48165 433 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 TFAP4Q01664 338 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 ALX1Q15699 326 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 LRRC47Q8N1G4 583 aaKnown RBP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 NEDD1Q8NHV4 660 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 U2AF1L4Q8WU68 220 aaKnown RBP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 USP6NLQ92738 828 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 MOV10L1Q9BXT6 1211 aaKnown RBP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 SPATC1LQ9H0A9 340 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 MTMR4Q9NYA4 1195 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 CLIP2Q9UDT6 1046 aa11.05□□□□□ -0.64
ZNF250-209ENST00000533543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.05□□□□□ -0.64
ZNF250-209ENST00000533543 PLIN4Q96Q06 1357 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 F5H6K3 240 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 TTLL1O95922 423 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 FGAP02671 866 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 XRCC5P13010 732 aaKnown RBP11.04□□□□□ -0.64
ZNF250-209ENST00000533543 ZKSCAN1P17029 563 aaPredicted RBP11.04□□□□□ -0.64
ZNF250-209ENST00000533543 ERCC3P19447 782 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 PTPREP23469 700 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 KLRC3Q07444 240 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 MAP2K5Q13163 448 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 PLS1Q14651 629 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 CCL14Q16627 93 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 CWC27Q6UX04 472 aaKnown RBP11.04□□□□□ -0.64
ZNF250-209ENST00000533543 EFCAB3Q8N7B9 438 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 MB21D1Q8N884 522 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 NKX2-3Q8TAU0 364 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 DEFB118Q96PH6 123 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 APBA2Q99767 749 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.04□□□□□ -0.64
ZNF250-209ENST00000533543 DIAPH3Q9NSV4 1193 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 ANAPC4Q9UJX5 808 aa11.04□□□□□ -0.64
ZNF250-209ENST00000533543 PPP1R9AQ9ULJ8 1098 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms