RNA–Protein interactions for RNA: ENST00000532044.1

AP003040.1-201, humanhuman

BASIC

Gene AP003040.1, Length 1,024 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003040.1-201ENST00000532044 APPBP2Q92624 585 aa15.3■□□□□ 0.04
AP003040.1-201ENST00000532044 LRCH3Q96II8 777 aa15.3■□□□□ 0.04
AP003040.1-201ENST00000532044 FBXO28Q9NVF7 368 aa15.3■□□□□ 0.04
AP003040.1-201ENST00000532044 PCDHB15Q9Y5E8 787 aa15.3■□□□□ 0.04
AP003040.1-201ENST00000532044 PLIN4Q96Q06 1357 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 SYN1P17600 705 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 ATP2B2Q01814 1243 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 LRIT3Q3SXY7 679 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 RIOX2Q8IUF8 465 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 MAML3Q96JK9 1138 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 BCL11AQ9H165 835 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 CWC22Q9HCG8 908 aaKnown RBP15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 PPP1R9AQ9ULJ8 1098 aa15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 ZNFX1Q9P2E3 1918 aaKnown RBP15.29■□□□□ 0.04
AP003040.1-201ENST00000532044 M0R2C6 588 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 DNM1LO00429 736 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 VWA5AO00534 786 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 FOXP2O15409 715 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 RNF113AO15541 343 aaKnown RBP15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 GPR153Q6NV75 609 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 OTUD7AQ8TE49 926 aaPredicted RBP15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 NYAP2Q9P242 653 aa15.28■□□□□ 0.04
AP003040.1-201ENST00000532044 PLXNA1Q9UIW2 1896 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 TTC41PQ6P2S7 1318 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 SEPT4O43236 478 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 GPAA1O43292 621 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 ZFYP08048 801 aaPredicted RBP15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 SNX17Q15036 470 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 AMOTL1Q8IY63 956 aa15.27■□□□□ 0.04
AP003040.1-201ENST00000532044 UNC80Q8N2C7 3258 aa15.27■□□□□ 0.03
AP003040.1-201ENST00000532044 MYH4Q9Y623 1939 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 SLC25A27O95847 323 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 ZNF792Q3KQV3 632 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 FAM83BQ5T0W9 1011 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 DPP9Q86TI2 863 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 TDHQ8IZJ6 230 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 DDRGK1Q96HY6 314 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 NRBP1Q9UHY1 535 aa15.26■□□□□ 0.03
AP003040.1-201ENST00000532044 NDUFB10O96000 172 aa15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 PLS1Q14651 629 aa15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 NCAPG2Q86XI2 1143 aa15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 MKL1Q969V6 931 aa15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 NUP88Q99567 741 aaPredicted RBP15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 SYNPO2Q9UMS6 1093 aa15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 DIS3Q9Y2L1 958 aaKnown RBP15.25■□□□□ 0.03
AP003040.1-201ENST00000532044 SMCHD1A6NHR9 2005 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 DNAJC25-GNG10A0A024R161 153 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 ATP2A1O14983 1001 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 FCER1AP12319 257 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 GNAT2P19087 354 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 STAT3P40763 770 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 ZMYM1Q5SVZ6 1142 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 PRAMEF19Q5SWL8 479 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 GPATCH3Q96I76 525 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 SENP6Q9GZR1 1112 aaPredicted RBP15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 CDH23Q9H251 3354 aa15.24■□□□□ 0.03
AP003040.1-201ENST00000532044 F5H6K3 240 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 PGK2P07205 417 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 ZNF865P0CJ78 1059 aaPredicted RBP15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 TAL1P17542 331 aaPredicted RBP15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 CNGA1P29973 690 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 COPB2P35606 906 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 KLRC3Q07444 240 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 LRRC41Q15345 812 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 FAM47AQ5JRC9 791 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 C1orf53Q5VUE5 145 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 IFNL3Q8IZI9 196 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 CEP95Q96GE4 821 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 FGD4Q96M96 766 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 SLF1Q9BQI6 1058 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 SLC5A4Q9NY91 659 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 MTMR4Q9NYA4 1195 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 RIPK3Q9Y572 518 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 CHD9Q3L8U1 2897 aa15.23■□□□□ 0.03
AP003040.1-201ENST00000532044 EYSQ5T1H1 3165 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 PATL2C9JE40 543 aaKnown RBP15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 RTP1P59025 263 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 ANO1Q5XXA6 986 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 GMCL1P1Q8NEA9 526 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 MMP19Q99542 508 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 TINF2Q9BSI4 451 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 TEX13BQ9BXU2 312 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 UBE2OQ9C0C9 1292 aaKnown RBP15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 TACC3Q9Y6A5 838 aa15.22■□□□□ 0.03
AP003040.1-201ENST00000532044 MINDY4BA8MYZ0 360 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 PRDM1O75626 825 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 RRP1P56182 461 aaKnown RBP15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 SLC39A5Q6ZMH5 540 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 ARRDC4Q8NCT1 418 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 NEDD1Q8NHV4 660 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 MKNK2Q9HBH9 465 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 SLC38A10Q9HBR0 1119 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 PHF24Q9UPV7 400 aa15.21■□□□□ 0.03
AP003040.1-201ENST00000532044 ADAMTS4O75173 837 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms