RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 NYAP2Q9P242 653 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 TRIOBPQ9H2D6 2365 aa16.55■□□□□ 0.24
CHRDL2-205ENST00000528471 STRNO43815 780 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 SLC34A2O95436 690 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 TSPY3P0CV98 308 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 TSPY8P0CW00 308 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 PPARAQ07869 468 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 NECAB2Q7Z6G3 386 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 SMC5Q8IY18 1101 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 PAWRQ96IZ0 340 aaKnown RBP16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 FBXO28Q9NVF7 368 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 NR2E3Q9Y5X4 410 aa16.54■□□□□ 0.24
CHRDL2-205ENST00000528471 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 TRIM6-TRIM34B2RNG4 842 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 HOXC6P09630 235 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 ADORA2AP29274 412 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 CCND3P30281 292 aaPredicted RBP16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 DIS3LQ8TF46 1054 aaKnown RBP16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 NUP88Q99567 741 aaPredicted RBP16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 SLC5A4Q9NY91 659 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 CLIP2Q9UDT6 1046 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 PPP1R9AQ9ULJ8 1098 aa16.53■□□□□ 0.24
CHRDL2-205ENST00000528471 F5H6K3 240 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 EVI5O60447 810 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 SLC25A27O95847 323 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 NDUFB10O96000 172 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 KLRC3Q07444 240 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 TMEM132BQ14DG7 1078 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 NPLOC4Q8TAT6 608 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 SLF1Q9BQI6 1058 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 HELLSQ9NRZ9 838 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 FLRT1Q9NZU1 646 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 OGDHLQ9ULD0 1010 aa16.52■□□□□ 0.24
CHRDL2-205ENST00000528471 IGKV6D-41A0A0C4DH26 115 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 VWA5AO00534 786 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 TTLL1O95922 423 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 FCER1AP12319 257 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 LRRC47Q8N1G4 583 aaKnown RBP16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 NEDD1Q8NHV4 660 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 RILPL2Q969X0 211 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 NBPF3Q9H094 633 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 MTMR4Q9NYA4 1195 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 LAMA4Q16363 1823 aa16.51■□□□□ 0.23
CHRDL2-205ENST00000528471 CNGA1P29973 690 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 CYP2C19P33261 490 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 COPB2P35606 906 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 TFAP4Q01664 338 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 NUCB1Q02818 461 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 MCMDC2Q4G0Z9 681 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 HABP4Q5JVS0 413 aaKnown RBP16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 TICAM2Q86XR7 235 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 ABRAQ8N0Z2 381 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 FAM227BQ96M60 508 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 C11orf49Q9H6J7 331 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 SYNPO2Q9UMS6 1093 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 ADAMTS5Q9UNA0 930 aa16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 CTDP1Q9Y5B0 961 aaPredicted RBP16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 SUPT16HQ9Y5B9 1047 aaKnown RBP16.5■□□□□ 0.23
CHRDL2-205ENST00000528471 A0A0D9SFI3 127 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 TSPY2A6NKD2 308 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 FOXP2O15409 715 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 IGHDP01880 384 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 STAT3P40763 770 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 CTDSPL2Q05D32 466 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 OLFML2BQ68BL8 750 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 RIOX2Q8IUF8 465 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 MMP19Q99542 508 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 COLQQ9Y215 455 aaPredicted RBP16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 SMCHD1A6NHR9 2005 aa16.49■□□□□ 0.23
CHRDL2-205ENST00000528471 MSCO60682 206 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 COBLO75128 1261 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 NMIQ13287 307 aaPredicted RBP16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 KCTD2Q14681 263 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 CHRDL2Q6WN34 429 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 GMCL1P1Q8NEA9 526 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 MKL1Q969V6 931 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 KIFC2Q96AC6 838 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 DDX20Q9UHI6 824 aaKnown RBP16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 ZNF214Q9UL59 606 aaPredicted RBP16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 MCM3APO60318 1980 aa16.48■□□□□ 0.23
CHRDL2-205ENST00000528471 RANBP6O60518 1105 aaKnown RBP16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 SLFN13Q68D06 897 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 LHX8Q68G74 356 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 SNRNP48Q6IEG0 339 aaKnown RBP16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 PLEKHM2Q8IWE5 1019 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 REPS2Q8NFH8 660 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 TOMM22Q9NS69 142 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 FEM1BQ9UK73 627 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 STX8Q9UNK0 236 aa16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.47■□□□□ 0.23
CHRDL2-205ENST00000528471 CCDC171Q6TFL3 1326 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms