RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 ABRAQ8N0Z2 381 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 MB21D1Q8N884 522 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 ACER1Q8TDN7 264 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 ADAMTS19Q8TE59 1207 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 XPNPEP3Q9NQH7 507 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 NRBP1Q9UHY1 535 aa12.74□□□□□ -0.37
CPSF1-203ENST00000527916 MYH1P12882 1939 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 COBLO75128 1261 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 IDH1O75874 414 aaKnown RBP12.73□□□□□ -0.37
CPSF1-203ENST00000527916 CCDC129Q6ZRS4 1044 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 TOX2Q96NM4 488 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 UHRF1Q96T88 793 aaPredicted RBP12.73□□□□□ -0.37
CPSF1-203ENST00000527916 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 IL1RAPL2Q9NP60 686 aa12.73□□□□□ -0.37
CPSF1-203ENST00000527916 IFIT2P09913 472 aaKnown RBP12.72□□□□□ -0.37
CPSF1-203ENST00000527916 FCER1AP12319 257 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 PLS1Q14651 629 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 SLC44A5Q8NCS7 719 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 MAML3Q96JK9 1138 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 TSPYL2Q9H2G4 693 aaPredicted RBP12.72□□□□□ -0.37
CPSF1-203ENST00000527916 ANTXR1Q9H6X2 564 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 CHD7Q9P2D1 2997 aa12.72□□□□□ -0.37
CPSF1-203ENST00000527916 A0A1W2PQ45 241 aaPredicted RBP12.71□□□□□ -0.37
CPSF1-203ENST00000527916 A0A1W2PQY0 241 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 PGK1P00558 417 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 TIMP1P01033 207 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
CPSF1-203ENST00000527916 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 ANKRD33Q7Z3H0 272 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 MAGEB6Q8N7X4 407 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 NUP133Q8WUM0 1156 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 TSEN34Q9BSV6 310 aaKnown RBP12.71□□□□□ -0.37
CPSF1-203ENST00000527916 C1QTNF1Q9BXJ1 281 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 PIEZO1Q92508 2521 aa12.71□□□□□ -0.37
CPSF1-203ENST00000527916 XIRP2A4UGR9 3374 aa12.7□□□□□ -0.38
CPSF1-203ENST00000527916 FAAP100Q0VG06 881 aa12.7□□□□□ -0.38
CPSF1-203ENST00000527916 PPIGQ13427 754 aaKnown RBP eCLIP12.7□□□□□ -0.383e-11■■□□□ 13.4
CPSF1-203ENST00000527916 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.7□□□□□ -0.383e-14■■■■■ 38
CPSF1-203ENST00000527916 STARD7Q9NQZ5 370 aa12.7□□□□□ -0.38
CPSF1-203ENST00000527916 MSRAQ9UJ68 235 aa12.7□□□□□ -0.38
CPSF1-203ENST00000527916 ZNFX1Q9P2E3 1918 aaKnown RBP12.7□□□□□ -0.38
CPSF1-203ENST00000527916 MROH7Q68CQ1 1323 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 MPHOSPH10O00566 681 aaKnown RBP12.69□□□□□ -0.38
CPSF1-203ENST00000527916 FLOT1O75955 427 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 SLC25A27O95847 323 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 AKR1A1P14550 325 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 ATP5JP18859 108 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 IGFBP4P22692 258 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 SEPT2Q15019 361 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 RAB30Q15771 203 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 SLC9C2Q5TAH2 1124 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 MFSD5Q6N075 450 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 MIGA1Q8NAN2 632 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 RIOK1Q9BRS2 568 aaKnown RBP12.69□□□□□ -0.38
CPSF1-203ENST00000527916 TINF2Q9BSI4 451 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 PBX4Q9BYU1 374 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
CPSF1-203ENST00000527916 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 APBB1O00213 710 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 POLR3DP05423 398 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 DSG3P32926 999 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 SHMT1P34896 483 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 ACLYP53396 1101 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 KCTD2Q14681 263 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 CCDC85BQ15834 202 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 AAK1Q2M2I8 961 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 PSRC1Q6PGN9 363 aaPredicted RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 TMEM199Q8N511 208 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 MMP19Q99542 508 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 LRRCC1Q9C099 1032 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 MTIF3Q9H2K0 278 aaKnown RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 SH2D4AQ9H788 454 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 DIS3Q9Y2L1 958 aaKnown RBP12.68□□□□□ -0.38
CPSF1-203ENST00000527916 REV3LO60673 3130 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 ROBO3Q96MS0 1386 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 PLXNA1Q9UIW2 1896 aa12.68□□□□□ -0.38
CPSF1-203ENST00000527916 MAGEB6P1A0A0J9YX57 407 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 TCRBV5S4A2TA0A5A2 114 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 PDE6AP16499 860 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 PBX2P40425 430 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 TMEM240Q5SV17 173 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 HAUS7Q99871 368 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 TBX21Q9UL17 535 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 HCN4Q9Y3Q4 1203 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
CPSF1-203ENST00000527916 TRANK1O15050 2925 aa12.67□□□□□ -0.38
CPSF1-203ENST00000527916 MYH7P12883 1935 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 A0A1W2PRG0 241 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 GRXCR1A8MXD5 290 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 GOLIM4O00461 696 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 ADAMTS4O75173 837 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 COPB2P35606 906 aa12.66□□□□□ -0.38
CPSF1-203ENST00000527916 PLCD1P51178 756 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms