RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 VEZTQ9HBM0 779 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 ARHGEF10LQ9HCE6 1279 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 GINM1Q9NU53 330 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 DACT1Q9NYF0 836 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 PCDHA7Q9UN72 937 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 PCDHA4Q9UN74 947 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 CLIC4Q9Y696 253 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 FER1L6Q2WGJ9 1857 aa11.44□□□□□ -0.58
VPS13B-212ENST00000524330 DDTLA6NHG4 134 aaPredicted RBP11.43□□□□□ -0.58
VPS13B-212ENST00000524330 TCP10L2B9ZVM9 353 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 TBC1D12O60347 775 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 NAPAP54920 295 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 ICA1Q05084 483 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 MCTP2Q6DN12 878 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 KRT25Q7Z3Z0 450 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 HEATR3Q7Z4Q2 680 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 FERMT2Q96AC1 680 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 TIGD1Q96MW7 591 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 MYOZ2Q9NPC6 264 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 BARHL2Q9NY43 387 aa11.43□□□□□ -0.58
VPS13B-212ENST00000524330 ZNF646O15015 1829 aaPredicted RBP11.43□□□□□ -0.58
VPS13B-212ENST00000524330 PSDA5PKW4 1024 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-212ENST00000524330 H7C1D1 291 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 SNHG28P0DPA3 235 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 PDHBP11177 359 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 LIG1P18858 919 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 CACNB3P54284 484 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 ZNF543Q08ER8 600 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 ORC2Q13416 577 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-212ENST00000524330 KANK3Q6NY19 840 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 ZNF579Q8NAF0 562 aaKnown RBP11.42□□□□□ -0.58
VPS13B-212ENST00000524330 SDF4Q9BRK5 362 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 RIOX1Q9H6W3 641 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 GOPCQ9HD26 462 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 GJB4Q9NTQ9 266 aa11.42□□□□□ -0.58
VPS13B-212ENST00000524330 BRCA1P38398 1863 aaKnown RBP11.42□□□□□ -0.58
VPS13B-212ENST00000524330 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 CLRN2A0PK11 232 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 USP17L5A8MUK1 530 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 NFKBIEO00221 500 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 SLC1A4P43007 532 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 SYKP43405 635 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 ZNF280AP59817 542 aaPredicted RBP11.41□□□□□ -0.58
VPS13B-212ENST00000524330 CCDC173Q0VFZ6 552 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 TTC38Q5R3I4 469 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 SLFN13Q68D06 897 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 USP17L2Q6R6M4 530 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 TEX2Q8IWB9 1127 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 LRRC47Q8N1G4 583 aaKnown RBP11.41□□□□□ -0.58
VPS13B-212ENST00000524330 STAG2Q8N3U4 1231 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 GMCL1P1Q8NEA9 526 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 PIBF1Q8WXW3 757 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 NAP1L4Q99733 375 aaKnown RBP11.41□□□□□ -0.58
VPS13B-212ENST00000524330 NAT10Q9H0A0 1025 aaKnown RBP11.41□□□□□ -0.58
VPS13B-212ENST00000524330 ZBTB12Q9Y330 459 aaPredicted RBP11.41□□□□□ -0.58
VPS13B-212ENST00000524330 ADAMTSL1Q8N6G6 1762 aa11.41□□□□□ -0.58
VPS13B-212ENST00000524330 ARFGEF1Q9Y6D6 1849 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 PNMA6FA0A0J9YX94 578 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 LAD1O00515 517 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 RAD21O60216 631 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 NR1I2O75469 434 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 GOLGA8HP0CJ92 632 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 XRCC6P12956 609 aaKnown RBP eCLIP11.4□□□□□ -0.58
VPS13B-212ENST00000524330 EEF2P13639 858 aaKnown RBP11.4□□□□□ -0.58
VPS13B-212ENST00000524330 TXLNAP40222 546 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 PTGER2P43116 358 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 MRPL12P52815 198 aaKnown RBP11.4□□□□□ -0.58
VPS13B-212ENST00000524330 NR5A1Q13285 461 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 PTPAQ15257 358 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 DCAF15Q66K64 600 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 HOMER1Q86YM7 354 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 ZFPM1Q8IX07 1006 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 ZMYND12Q9H0C1 365 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 VAT1LQ9HCJ6 419 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 USP25Q9UHP3 1055 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 SRPRBQ9Y5M8 271 aaKnown RBP11.4□□□□□ -0.58
VPS13B-212ENST00000524330 GJA3Q9Y6H8 435 aa11.4□□□□□ -0.58
VPS13B-212ENST00000524330 hCG_1642624A0A1W2PR95 340 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 SMCO2A6NFE2 343 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 FZD9O00144 591 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 STXBP3O00186 592 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ASNSP08243 561 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ATP2B1P20020 1258 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 LMNB1P20700 586 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 PTPREP23469 700 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 MARCKSP29966 332 aaPredicted RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ADCY7P51828 1080 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 IKQ13123 557 aaPredicted RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 SEPT2Q15019 361 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 NONOQ15233 471 aaKnown RBP eCLIP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 STX1AQ16623 288 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ARL6IP4Q66PJ3 421 aaKnown RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 WWC2Q6AWC2 1192 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 RBM43Q6ZSC3 357 aaKnown RBP11.39□□□□□ -0.59
VPS13B-212ENST00000524330 PIK3AP1Q6ZUJ8 805 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 ARHGAP27Q6ZUM4 889 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 SH3BP5LQ7L8J4 393 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 GAS2L3Q86XJ1 694 aa11.39□□□□□ -0.59
VPS13B-212ENST00000524330 APOBEC3FQ8IUX4 373 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms