RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 PFKFB2O60825 505 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 NOVP48745 357 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 BACE1P56817 501 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 MAP3K11Q16584 847 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 HOMER1Q86YM7 354 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 RBM46Q8TBY0 533 aaKnown RBP14.4□□□□□ -0.11
PABPC1-219ENST00000522387 ANKS1AQ92625 1134 aa14.4□□□□□ -0.11
PABPC1-219ENST00000522387 CTDNEP1O95476 244 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 PARP1P09874 1014 aaKnown RBP14.39□□□□□ -0.11
PABPC1-219ENST00000522387 EVCP57679 992 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 ERO1BQ86YB8 467 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 MKL1Q969V6 931 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 MTA3Q9BTC8 594 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 AS3MTQ9HBK9 375 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 GOPCQ9HD26 462 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 EMILIN3Q9NT22 766 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 FBXO28Q9NVF7 368 aa14.39□□□□□ -0.11
PABPC1-219ENST00000522387 TMEM232C9JQI7 657 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 KLRF2D3W0D1 207 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 NOL9Q5SY16 702 aaKnown RBP14.38□□□□□ -0.11
PABPC1-219ENST00000522387 GADL1Q6ZQY3 521 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 SRBD1Q8N5C6 995 aaKnown RBP14.38□□□□□ -0.11
PABPC1-219ENST00000522387 ZSCAN31Q96LW9 406 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-219ENST00000522387 TANGO6Q9C0B7 1094 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 VCPKMTQ9H867 229 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 DDAH1O94760 285 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 TREML2Q5T2D2 321 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 SLC26A6Q9BXS9 759 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 SH2B1Q9NRF2 756 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-219ENST00000522387 GJB4Q9NTQ9 266 aa14.38□□□□□ -0.11
PABPC1-219ENST00000522387 GOLGA6L3A6NEY3 463 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 SPDYE5A6NIY4 337 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 VCAM1P19320 739 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 PPATQ06203 517 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 KIFC2Q96AC6 838 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 AIFM3Q96NN9 605 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 TRPM7Q96QT4 1865 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 CYTH3O43739 400 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 PEX10O60683 326 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 BMP3P12645 472 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 TAL1P17542 331 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-219ENST00000522387 SLC35G1Q2M3R5 365 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 KIAA1683Q9H0B3 1180 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 SH2D4AQ9H788 454 aa14.37□□□□□ -0.11
PABPC1-219ENST00000522387 V9GY48 417 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-219ENST00000522387 PTPDC1A2A3K4 754 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 DDIT3P35638 169 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 NT5C2P49902 561 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 ZNF543Q08ER8 600 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 GRM4Q14833 912 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 CYP4F22Q6NT55 531 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 GZF1Q9H116 711 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-219ENST00000522387 RPAP3Q9H6T3 665 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-219ENST00000522387 PAPPA2Q9BXP8 1791 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 CALM1P0DP23 149 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 CALM2P0DP24 149 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 CALM3P0DP25 149 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 GJB2P29033 226 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 KIF5BP33176 963 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 FKBP1BP68106 108 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 NTRK3Q16288 839 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 FOXD4L5Q5VV16 416 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-219ENST00000522387 NSUN7Q8NE18 718 aaKnown RBP14.36□□□□□ -0.11
PABPC1-219ENST00000522387 GMCL1P1Q8NEA9 526 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 FOXD4L4Q8WXT5 416 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-219ENST00000522387 ZIC5Q96T25 663 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 WDR18Q9BV38 432 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 TMOD4Q9NZQ9 345 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 PHIPQ8WWQ0 1821 aa14.36□□□□□ -0.11
PABPC1-219ENST00000522387 FSD2A1L4K1 749 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 PALM3A6NDB9 673 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-219ENST00000522387 TRAK2O60296 914 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 FLOT1O75955 427 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 ECM2O94769 699 aaPredicted RBP14.35□□□□□ -0.11
PABPC1-219ENST00000522387 GUCY1B3Q02153 619 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 PPP4R3BQ5MIZ7 849 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 WNK4Q96J92 1243 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 SMC3Q9UQE7 1217 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 SNHG28P0DPA3 235 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 XRCC6P12956 609 aaKnown RBP eCLIP14.35□□□□□ -0.11
PABPC1-219ENST00000522387 PKP1Q13835 747 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 TMTC3Q6ZXV5 915 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 ADGRF4Q8IZF3 695 aa14.35□□□□□ -0.11
PABPC1-219ENST00000522387 TNPO1Q92973 898 aaKnown RBP14.35□□□□□ -0.11
PABPC1-219ENST00000522387 CCDC196A0A1B0GTZ2 297 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 STAT2P52630 851 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 USP14P54578 494 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 FSTL1Q12841 308 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 PPIL2Q13356 520 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 CUL4AQ13619 759 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 OTUD7BQ6GQQ9 843 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 PIGSQ96S52 555 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 RRAGDQ9NQL2 400 aaPredicted RBP14.34□□□□□ -0.11
PABPC1-219ENST00000522387 TLL2Q9Y6L7 1015 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 HTTP42858 3142 aa14.34□□□□□ -0.11
PABPC1-219ENST00000522387 FDPSP14324 419 aaKnown RBP14.33□□□□□ -0.11
PABPC1-219ENST00000522387 SPRYD7Q5W111 196 aa14.33□□□□□ -0.11
PABPC1-219ENST00000522387 GPKOWQ92917 476 aaPredicted RBP eCLIP14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms