RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 DPF2Q92785 391 aa12.87□□□□□ -0.35
CLK4-206ENST00000520878 SERPINB13Q9UIV8 391 aa12.87□□□□□ -0.35
CLK4-206ENST00000520878 PCDHA4Q9UN74 947 aa12.87□□□□□ -0.35
CLK4-206ENST00000520878 COL16A1Q07092 1604 aaPredicted RBP12.87□□□□□ -0.35
CLK4-206ENST00000520878 RCAN1P53805 252 aa12.87□□□□□ -0.35
CLK4-206ENST00000520878 ADKP55263 362 aaKnown RBP12.87□□□□□ -0.35
CLK4-206ENST00000520878 RTFDC1Q9BY42 306 aaPredicted RBP12.87□□□□□ -0.35
CLK4-206ENST00000520878 TMEM232C9JQI7 657 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 POLRMTO00411 1230 aaKnown RBP12.86□□□□□ -0.35
CLK4-206ENST00000520878 NPR1P16066 1061 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 WWC2Q6AWC2 1192 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 RCSD1Q6JBY9 416 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 VPS16Q9H269 839 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 KCNQ5Q9NR82 932 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 TAF1P21675 1872 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 AKR1B1P15121 316 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 ERCC3P19447 782 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 TECP42680 631 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
CLK4-206ENST00000520878 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 CCDC150Q8NCX0 1101 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 VEZTQ9HBM0 779 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 SHANK3Q9BYB0 1731 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 STIM1Q13586 685 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 NONOQ15233 471 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLK4-206ENST00000520878 TSR1Q2NL82 804 aaKnown RBP12.86□□□□□ -0.35
CLK4-206ENST00000520878 PAGE5Q96GU1 130 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 PRIMPOLQ96LW4 560 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 HPSEQ9Y251 543 aa12.86□□□□□ -0.35
CLK4-206ENST00000520878 SARM1Q6SZW1 724 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 REXO1Q8N1G1 1221 aaKnown RBP12.85□□□□□ -0.35
CLK4-206ENST00000520878 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
CLK4-206ENST00000520878 ATP6V0A2Q9Y487 856 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 GPR75-ASB3A0A0A6YYF3 556 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 USP27XA6NNY8 438 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 SLFN14P0C7P3 912 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 ASIC1P78348 528 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 KIF18AQ8NI77 898 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 CRAMP1Q96RY5 1269 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 TMOD2Q9NZR1 351 aa12.85□□□□□ -0.35
CLK4-206ENST00000520878 PPIP5K2O43314 1243 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 GDF11O95390 407 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 PPP4CP60510 307 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 GRM4Q14833 912 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 KRT18P05783 430 aaKnown RBP12.84□□□□□ -0.35
CLK4-206ENST00000520878 PRKCSHP14314 528 aaPredicted RBP12.84□□□□□ -0.35
CLK4-206ENST00000520878 SLC1A4P43007 532 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 FMR1Q06787 632 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLK4-206ENST00000520878 ZYXQ15942 572 aaKnown RBP12.84□□□□□ -0.35
CLK4-206ENST00000520878 GLIPR1L2Q4G1C9 344 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 RBM26Q5T8P6 1007 aaKnown RBP12.84□□□□□ -0.35
CLK4-206ENST00000520878 SYT10Q6XYQ8 523 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 TMEM260Q9NX78 707 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 DNAI1Q9UI46 699 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 SYNRGQ9UMZ2 1314 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 RXRBP28702 533 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 SNAP25P60880 206 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 CERS3Q8IU89 383 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 NEDD1Q8NHV4 660 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 TBCKQ8TEA7 893 aa12.84□□□□□ -0.35
CLK4-206ENST00000520878 CLRN2A0PK11 232 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 IKBKBO14920 756 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 C21orf2O43822 256 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
CLK4-206ENST00000520878 FUT2Q10981 343 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 NFIAQ12857 509 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 CUL4BQ13620 913 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 USH1GQ495M9 461 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 NUP88Q99567 741 aaPredicted RBP12.83□□□□□ -0.36
CLK4-206ENST00000520878 MAD2L2Q9UI95 211 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 TUBE1Q9UJT0 475 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 FAM205AQ6ZU69 1335 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 DYNC1I1O14576 645 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 ADAMTS3O15072 1205 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 EN1Q05925 392 aaPredicted RBP12.83□□□□□ -0.36
CLK4-206ENST00000520878 TMEM266Q2M3C6 531 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 TTBK2Q6IQ55 1244 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 TYW1BQ6NUM6 668 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
CLK4-206ENST00000520878 SPICE1Q8N0Z3 855 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 AKAP11Q9UKA4 1901 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 PAPPAQ13219 1627 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 RAD17O75943 681 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 SRGNP10124 158 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 ZNF76P36508 570 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 CRKP46108 304 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 UBE2SQ16763 222 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 AOC3Q16853 763 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 DYMQ7RTS9 669 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 PROM2Q8N271 834 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 MNS1Q8NEH6 495 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 LZTS2Q9BRK4 669 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 TAB2Q9NYJ8 693 aa12.83□□□□□ -0.36
CLK4-206ENST00000520878 MYO5AQ9Y4I1 1855 aaKnown RBP12.82□□□□□ -0.36
CLK4-206ENST00000520878 TCP10L2B9ZVM9 353 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms