RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 BTBD18B2RXH4 712 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 SNHG28P0DPA3 235 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 SCG2P13521 617 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 CALML3P27482 149 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 LMOD1P29536 600 aaPredicted RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 ME1P48163 572 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 TRAPPC10P48553 1259 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 FOSBP53539 338 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 SNW1Q13573 536 aaKnown RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 GNL2Q13823 731 aaKnown RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 SF3A1Q15459 793 aaKnown RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 MAP3K11Q16584 847 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 AXDND1Q5T1B0 1012 aaPredicted RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 CCAR1Q8IX12 1150 aaKnown RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 ZNF579Q8NAF0 562 aaKnown RBP11.75□□□□□ -0.53
SNF8-214ENST00000515174 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 JDP2Q8WYK2 163 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 MKL1Q969V6 931 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 TIGD1Q96MW7 591 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 BRMS1Q9HCU9 246 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 SYNPO2Q9UMS6 1093 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 CEP131Q9UPN4 1083 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 GJA3Q9Y6H8 435 aa11.75□□□□□ -0.53
SNF8-214ENST00000515174 CUTAO60888 179 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 NR1I2O75469 434 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 SHMT1P34896 483 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 KRT2P35908 639 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 ECE1P42892 770 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 EIF6P56537 245 aaKnown RBP11.74□□□□□ -0.53
SNF8-214ENST00000515174 CXCL9Q07325 125 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 NPY5RQ15761 445 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 CIAPIN1Q6FI81 312 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 TATDN1Q6P1N9 297 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 CCDC73Q6ZRK6 1079 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 DAGLBQ8NCG7 672 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
SNF8-214ENST00000515174 TNFRSF25Q93038 417 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 CEP95Q96GE4 821 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 CAPNS2Q96L46 248 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 PPP1R9BQ96SB3 815 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 FAM198AQ9UFP1 575 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 HDAC9Q9UKV0 1011 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 ZBTB12Q9Y330 459 aaPredicted RBP11.74□□□□□ -0.53
SNF8-214ENST00000515174 PCDHAC2Q9Y5I4 1007 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 SCN4AP35499 1836 aa11.74□□□□□ -0.53
SNF8-214ENST00000515174 GREB1LQ9C091 1923 aaPredicted RBP11.74□□□□□ -0.53
SNF8-214ENST00000515174 SHTN1A0MZ66 631 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 hCG_1984214I3L0E3 225 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 TTLL1O95922 423 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 PARP1P09874 1014 aaKnown RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 MYH6P13533 1939 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 PTPREP23469 700 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 TOB1P50616 345 aaPredicted RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 NFIAQ12857 509 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 ASPRV1Q53RT3 343 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 FMR1NBQ8N0W7 255 aaPredicted RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 CMTR1Q8N1G2 835 aaKnown RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 CCDC82Q8N4S0 544 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 ZNF713Q8N859 430 aaPredicted RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 ANP32BQ92688 251 aaKnown RBP11.73□□□□□ -0.53
SNF8-214ENST00000515174 SHISA4Q96DD7 197 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 FTOQ9C0B1 505 aaKnown RBP eCLIP11.73□□□□□ -0.53
SNF8-214ENST00000515174 TNMDQ9H2S6 317 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 RIOX1Q9H6W3 641 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 NYAP2Q9P242 653 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 TSKSQ9UJT2 592 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 STX8Q9UNK0 236 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 KCNJ14Q9UNX9 436 aa11.73□□□□□ -0.53
SNF8-214ENST00000515174 POLR2AP24928 1970 aaKnown RBP11.72□□□□□ -0.53
SNF8-214ENST00000515174 OTOFQ9HC10 1997 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 SPDYE2BA6NHP3 402 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 KLRF2D3W0D1 207 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 FZD9O00144 591 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 SPDYE6P0CI01 402 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
SNF8-214ENST00000515174 CCDC173Q0VFZ6 552 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 PICALMQ13492 652 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 GPC2Q8N158 579 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 STAG2Q8N3U4 1231 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 FSIP1Q8NA03 581 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 CCDC148Q8NFR7 591 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 ZBED3Q96IU2 234 aaPredicted RBP11.72□□□□□ -0.53
SNF8-214ENST00000515174 KANSL2Q9H9L4 492 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 PCDH10Q9P2E7 1040 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 HERC5Q9UII4 1024 aaKnown RBP11.72□□□□□ -0.53
SNF8-214ENST00000515174 HPSEQ9Y251 543 aa11.72□□□□□ -0.53
SNF8-214ENST00000515174 MYH4Q9Y623 1939 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 ESYT2A0FGR8 921 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 M0R2N6 131 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 CYTH3O43739 400 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 TBC1D12O60347 775 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 KINO60870 393 aaKnown RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 AKR1B1P15121 316 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 GPATCH4Q5T3I0 446 aaKnown RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 RESP18Q5W5W9 173 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 SH3BP5LQ7L8J4 393 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms