RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 TMEM132BQ14DG7 1078 aa30.26■■■□□ 2.43
CLDND1-226ENST00000513287 CLEC10AQ8IUN9 316 aa30.26■■■□□ 2.43
CLDND1-226ENST00000513287 DIS3Q9Y2L1 958 aaKnown RBP30.26■■■□□ 2.43
CLDND1-226ENST00000513287 ZFYP08048 801 aaPredicted RBP30.25■■■□□ 2.43
CLDND1-226ENST00000513287 COPB2P35606 906 aa30.25■■■□□ 2.43
CLDND1-226ENST00000513287 NCAPG2Q86XI2 1143 aa30.25■■■□□ 2.43
CLDND1-226ENST00000513287 RIOX2Q8IUF8 465 aa30.25■■■□□ 2.43
CLDND1-226ENST00000513287 GPATCH3Q96I76 525 aa30.25■■■□□ 2.43
CLDND1-226ENST00000513287 UBE2OQ9C0C9 1292 aaKnown RBP30.25■■■□□ 2.43
CLDND1-226ENST00000513287 GSG1L2A8MUP6 293 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 SMARCA5O60264 1052 aaPredicted RBP30.24■■■□□ 2.43
CLDND1-226ENST00000513287 PLS1Q14651 629 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 APPBP2Q92624 585 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 MAML3Q96JK9 1138 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.24■■■□□ 2.43
CLDND1-226ENST00000513287 PPP1R9AQ9ULJ8 1098 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 DNAH12Q6ZR08 3092 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 ROBO3Q96MS0 1386 aa30.24■■■□□ 2.43
CLDND1-226ENST00000513287 VWA5AO00534 786 aa30.23■■■□□ 2.43
CLDND1-226ENST00000513287 NYAP2Q9P242 653 aa30.23■■■□□ 2.43
CLDND1-226ENST00000513287 COL11A1P12107 1806 aaPredicted RBP30.23■■■□□ 2.43
CLDND1-226ENST00000513287 GNAT2P19087 354 aa30.22■■■□□ 2.43
CLDND1-226ENST00000513287 LRRFIP1Q32MZ4 808 aaKnown RBP30.21■■■□□ 2.43
CLDND1-226ENST00000513287 OSBP2Q969R2 916 aa30.21■■■□□ 2.43
CLDND1-226ENST00000513287 ZNF214Q9UL59 606 aaPredicted RBP30.21■■■□□ 2.43
CLDND1-226ENST00000513287 SYNPO2Q9UMS6 1093 aa30.21■■■□□ 2.43
CLDND1-226ENST00000513287 RNF113AO15541 343 aaKnown RBP30.2■■■□□ 2.43
CLDND1-226ENST00000513287 RASA1P20936 1047 aa30.2■■■□□ 2.43
CLDND1-226ENST00000513287 STAT3P40763 770 aa30.2■■■□□ 2.43
CLDND1-226ENST00000513287 C1orf53Q5VUE5 145 aa30.2■■■□□ 2.43
CLDND1-226ENST00000513287 REPS2Q8NFH8 660 aa30.2■■■□□ 2.43
CLDND1-226ENST00000513287 ZNF287Q9HBT7 754 aa30.2■■■□□ 2.43
CLDND1-226ENST00000513287 SNX17Q15036 470 aa30.19■■■□□ 2.42
CLDND1-226ENST00000513287 KBTBD13C9JR72 458 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 MKL1Q969V6 931 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 MMP19Q99542 508 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 MKNK2Q9HBH9 465 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 FBXO28Q9NVF7 368 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 TTC41PQ6P2S7 1318 aa30.18■■■□□ 2.42
CLDND1-226ENST00000513287 KCTD2Q14681 263 aa30.17■■■□□ 2.42
CLDND1-226ENST00000513287 ZNF792Q3KQV3 632 aa30.17■■■□□ 2.42
CLDND1-226ENST00000513287 SLC39A5Q6ZMH5 540 aa30.17■■■□□ 2.42
CLDND1-226ENST00000513287 MSL3Q8N5Y2 521 aaKnown RBP30.17■■■□□ 2.42
CLDND1-226ENST00000513287 ATP2A1O14983 1001 aa30.16■■■□□ 2.42
CLDND1-226ENST00000513287 FAM83BQ5T0W9 1011 aa30.16■■■□□ 2.42
CLDND1-226ENST00000513287 GJC2Q5T442 439 aaPredicted RBP30.16■■■□□ 2.42
CLDND1-226ENST00000513287 LBHD1Q9BQE6 289 aaPredicted RBP30.16■■■□□ 2.42
CLDND1-226ENST00000513287 TINF2Q9BSI4 451 aa30.16■■■□□ 2.42
CLDND1-226ENST00000513287 SMCHD1A6NHR9 2005 aa30.16■■■□□ 2.42
CLDND1-226ENST00000513287 PLXNA1Q9UIW2 1896 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 IGKV6D-41A0A0C4DH26 115 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 PATL2C9JE40 543 aaKnown RBP30.15■■■□□ 2.42
CLDND1-226ENST00000513287 F5H6K3 240 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 GPAA1O43292 621 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 RTP1P59025 263 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 KLRC3Q07444 240 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 DHX30Q7L2E3 1194 aaKnown RBP eCLIP30.15■■■□□ 2.42
CLDND1-226ENST00000513287 PRPF38AQ8NAV1 312 aaKnown RBP30.15■■■□□ 2.42
CLDND1-226ENST00000513287 SLF1Q9BQI6 1058 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 PRKAG2Q9UGJ0 569 aa30.15■■■□□ 2.42
CLDND1-226ENST00000513287 COL6A3P12111 3177 aa30.14■■■□□ 2.42
CLDND1-226ENST00000513287 ATN1P54259 1190 aaPredicted RBP30.14■■■□□ 2.42
CLDND1-226ENST00000513287 MDM2Q00987 491 aaPredicted RBP30.14■■■□□ 2.42
CLDND1-226ENST00000513287 LRRC41Q15345 812 aa30.14■■■□□ 2.42
CLDND1-226ENST00000513287 PRAMEF19Q5SWL8 479 aa30.14■■■□□ 2.42
CLDND1-226ENST00000513287 DEFB123Q8N688 67 aa30.14■■■□□ 2.42
CLDND1-226ENST00000513287 TEX13BQ9BXU2 312 aa30.14■■■□□ 2.42
CLDND1-226ENST00000513287 MINDY4BA8MYZ0 360 aa30.13■■■□□ 2.41
CLDND1-226ENST00000513287 ZNF444Q8N0Y2 327 aaPredicted RBP30.13■■■□□ 2.41
CLDND1-226ENST00000513287 EPB41L4AQ9HCS5 686 aaPredicted RBP30.13■■■□□ 2.41
CLDND1-226ENST00000513287 ERC2O15083 957 aa30.12■■■□□ 2.41
CLDND1-226ENST00000513287 FAM109BQ6ICB4 259 aaPredicted RBP30.12■■■□□ 2.41
CLDND1-226ENST00000513287 NDUFB10O96000 172 aa30.11■■■□□ 2.41
CLDND1-226ENST00000513287 SAMD1Q6SPF0 538 aaPredicted RBP30.11■■■□□ 2.41
CLDND1-226ENST00000513287 PHF24Q9UPV7 400 aa30.11■■■□□ 2.41
CLDND1-226ENST00000513287 LTBP2Q14767 1821 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 MYH4Q9Y623 1939 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 PGK2P07205 417 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 RARBP10826 455 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 FAM47AQ5JRC9 791 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 MAMDC4Q6UXC1 1216 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 IFNL3Q8IZI9 196 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 NACAP1Q9BZK3 213 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 MTMR10Q9NXD2 777 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 MTMR4Q9NYA4 1195 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 CLIP2Q9UDT6 1046 aa30.1■■■□□ 2.41
CLDND1-226ENST00000513287 DNAJC25-GNG10A0A024R161 153 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 ZNF865P0CJ78 1059 aaPredicted RBP30.09■■■□□ 2.41
CLDND1-226ENST00000513287 FDX1P10109 184 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 TDO2P48775 406 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 ANO1Q5XXA6 986 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 ZNF467Q7Z7K2 595 aaPredicted RBP30.09■■■□□ 2.41
CLDND1-226ENST00000513287 RNF180Q86T96 592 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 GMCL1P1Q8NEA9 526 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 PI4K2BQ8TCG2 481 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 PLIN4Q96Q06 1357 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 XPNPEP3Q9NQH7 507 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 STXBP5LQ9Y2K9 1186 aa30.09■■■□□ 2.41
CLDND1-226ENST00000513287 SYNGAP1Q96PV0 1343 aa30.08■■■□□ 2.41
CLDND1-226ENST00000513287 POTEB2H3BUK9 544 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms