RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ZNFX1Q9P2E3 1918 aaKnown RBP16.23■□□□□ 0.19
CCHCR1-227ENST00000508852 MX1P20591 662 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 MNX1P50219 401 aaPredicted RBP16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 RRP1P56182 461 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 RIOX2Q8IUF8 465 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 C7orf61Q8IZ16 206 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 NPLOC4Q8TAT6 608 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 FSD1Q9BTV5 496 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 PPP1R9AQ9ULJ8 1098 aa16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 DIS3Q9Y2L1 958 aaKnown RBP16.22■□□□□ 0.19
CCHCR1-227ENST00000508852 DNM1LO00429 736 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 VWA5AO00534 786 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 RAD21O60216 631 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 IGHA2P01877 340 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 CHGBP05060 677 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 FDX1P10109 184 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 RASA1P20936 1047 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 STAT3P40763 770 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 KCTD2Q14681 263 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 TMEM132BQ14DG7 1078 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 KIAA1755Q5JYT7 1200 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 IFNL3Q8IZI9 196 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 PRPF38AQ8NAV1 312 aaKnown RBP16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 MKL1Q969V6 931 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 FLRT1Q9NZU1 646 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 CTDP1Q9Y5B0 961 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 PCDHB15Q9Y5E8 787 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 MYH4Q9Y623 1939 aa16.21■□□□□ 0.19
CCHCR1-227ENST00000508852 SEPT4O43236 478 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 CYBAP13498 195 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 CYP2C19P33261 490 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 MMP19Q99542 508 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 SLF1Q9BQI6 1058 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 NAPBQ9H115 298 aa16.2■□□□□ 0.18
CCHCR1-227ENST00000508852 PFASO15067 1338 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 F5H6K3 240 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 ZBED4O75132 1171 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 TTLL1O95922 423 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 KLRC3Q07444 240 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 HDAC1Q13547 482 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 FAM83BQ5T0W9 1011 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 SAMD1Q6SPF0 538 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 CLEC10AQ8IUN9 316 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 MAML3Q96JK9 1138 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 GDF15Q99988 308 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 TEX13BQ9BXU2 312 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 STAP2Q9UGK3 403 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 FEM1BQ9UK73 627 aa16.19■□□□□ 0.18
CCHCR1-227ENST00000508852 PLIN4Q96Q06 1357 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 M0R2C6 588 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 ATP2A1O14983 1001 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 COBLO75128 1261 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 TSPY3P0CV98 308 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 TSPY8P0CW00 308 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 ZMYM1Q5SVZ6 1142 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 TSHZ3Q63HK5 1081 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 GPR153Q6NV75 609 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 GMCL1P1Q8NEA9 526 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 MTMR4Q9NYA4 1195 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 PLXNA1Q9UIW2 1896 aa16.18■□□□□ 0.18
CCHCR1-227ENST00000508852 IGKV6D-41A0A0C4DH26 115 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 OAZ1P54368 228 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 ANKRD45Q5TZF3 282 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 NEDD1Q8NHV4 660 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 SENP6Q9GZR1 1112 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 EPB41L4AQ9HCS5 686 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 PRKAG2Q9UGJ0 569 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 ZNF214Q9UL59 606 aaPredicted RBP16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 RANBP2P49792 3224 aaKnown RBP16.17■□□□□ 0.18
CCHCR1-227ENST00000508852 SMIM22K7EJ46 135 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 NDUFB10O96000 172 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 CEP95Q96GE4 821 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 HELLSQ9NRZ9 838 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 FBXO28Q9NVF7 368 aa16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 ZMYND8Q9ULU4 1186 aaPredicted RBP16.16■□□□□ 0.18
CCHCR1-227ENST00000508852 RARBP10826 455 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 PPARAQ07869 468 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 LRRC26Q2I0M4 334 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 ZNF792Q3KQV3 632 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 STK11IPQ8N1F8 1099 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 TRPV1Q8NER1 839 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 REPS2Q8NFH8 660 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 CHURC1Q8WUH1 139 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 DDX11Q96FC9 970 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 LBHD1Q9BQE6 289 aaPredicted RBP16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 CNPY2Q9Y2B0 182 aa16.15■□□□□ 0.18
CCHCR1-227ENST00000508852 BMP3P12645 472 aa16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 MAGEA10P43363 369 aaPredicted RBP16.14■□□□□ 0.17
CCHCR1-227ENST00000508852 TFAP4Q01664 338 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms