RNA–Protein interactions for RNA: ENST00000504273.5

SNX25-202, Transcript of sorting nexin 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX25, Length 3,323 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-202ENST00000504273 ATP8A2Q9NTI2 1148 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 PCDHA5Q9Y5H7 936 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 MORC2Q9Y6X9 1032 aaPredicted RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 BRD2P25440 801 aaKnown RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 IL17AQ16552 155 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 SLC4A8Q2Y0W8 1093 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 CRY2Q49AN0 593 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 NT5DC1Q5TFE4 455 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 C12orf60Q5U649 245 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 ARMCX5Q6P1M9 558 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 C15orf52Q6ZUT6 534 aaKnown RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 TRIM22Q8IYM9 498 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 DYNLL2Q96FJ2 89 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 OSBPL5Q9H0X9 879 aaPredicted RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 CSRNP2Q9H175 543 aa8.07□□□□□ -1.12
SNX25-202ENST00000504273 SRPRBQ9Y5M8 271 aaKnown RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 ZNF646O15015 1829 aaPredicted RBP8.07□□□□□ -1.12
SNX25-202ENST00000504273 ROBO3Q96MS0 1386 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 CCDC196A0A1B0GTZ2 297 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 PCP11498 1178 aaKnown RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 GYS1P13807 737 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 DIXDC1Q155Q3 683 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 DRC7Q8IY82 874 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 ZNF579Q8NAF0 562 aaKnown RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 SPATA20Q8TB22 786 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 INTS13Q9NVM9 706 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 IFNKQ9P0W0 207 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 SERTAD1Q9UHV2 236 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 NRXN2Q9P2S2 1712 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 IKBKBO14920 756 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 DDAH1O94760 285 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 RASSF7Q02833 373 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 PPP2R5BQ15173 497 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 RILPL1Q5EBL4 403 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 DNTTIP2Q5QJE6 756 aaKnown RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 SOGA3Q5TF21 947 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 HACL1Q9UJ83 578 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 MAN1B1Q9UKM7 699 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 BECN2A8MW95 431 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 RFC4P35249 363 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 NOGQ13253 232 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 GNL2Q13823 731 aaKnown RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 ANKS1AQ92625 1134 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 RTFDC1Q9BY42 306 aaPredicted RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 CRNKL1Q9BZJ0 848 aaKnown RBP8.06□□□□□ -1.12
SNX25-202ENST00000504273 PRDM6Q9NQX0 595 aa8.06□□□□□ -1.12
SNX25-202ENST00000504273 M0R2N6 131 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 POLR2DO15514 142 aaKnown RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 PLCD1P51178 756 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 PPP4CP60510 307 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 FMR1Q06787 632 aaKnown RBP eCLIP8.05□□□□□ -1.12
SNX25-202ENST00000504273 DDR1Q08345 913 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 TYW1BQ6NUM6 668 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 SH3RF1Q7Z6J0 888 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 CATIPQ7Z7H3 387 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 STAG2Q8N3U4 1231 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 EPSTI1Q96J88 318 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 PRIMPOLQ96LW4 560 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 NAT10Q9H0A0 1025 aaKnown RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 LEMD3Q9Y2U8 911 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 SNED1Q8TER0 1413 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 COL11A2P13942 1736 aaPredicted RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 DYNC1I1O14576 645 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 MKRN4PQ13434 485 aaPredicted RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 MORC3Q14149 939 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 PTPN21Q16825 1174 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 RASGRP2Q7LDG7 609 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 TTLL6Q8N841 843 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 C4orf32Q8N8J7 132 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 SLC44A5Q8NCS7 719 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 KCND1Q9NSA2 647 aa8.05□□□□□ -1.12
SNX25-202ENST00000504273 RBM28Q9NW13 759 aaKnown RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 ARPP21Q9UBL0 812 aaPredicted RBP8.05□□□□□ -1.12
SNX25-202ENST00000504273 TMEM232C9JQI7 657 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 RIOK3O14730 519 aaKnown RBP8.04□□□□□ -1.12
SNX25-202ENST00000504273 FANCCQ00597 558 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 NYAP1Q6ZVC0 841 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 POLLQ9UGP5 575 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 CLEC11AQ9Y240 323 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 XDHP47989 1333 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 FAM205AQ6ZU69 1335 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 USP17L3A6NCW0 530 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 USP17L4A6NCW7 530 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 CYTH3O43739 400 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 IL1R1P14778 569 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 ATP2B1P20020 1258 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 CASP1P29466 404 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 KRT2P35908 639 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 SAFBQ15424 915 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNX25-202ENST00000504273 PFKFB3Q16875 520 aaPredicted RBP8.04□□□□□ -1.12
SNX25-202ENST00000504273 SAMD1Q6SPF0 538 aaPredicted RBP8.04□□□□□ -1.12
SNX25-202ENST00000504273 USP17L1Q7RTZ2 530 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 FILIP1Q7Z7B0 1213 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 IQCA1Q86XH1 822 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 CNNM3Q8NE01 707 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 FANCLQ9NW38 375 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 MCM9Q9NXL9 1143 aa8.04□□□□□ -1.12
SNX25-202ENST00000504273 MAD2L2Q9UI95 211 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms