RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 RTFDC1Q9BY42 306 aaPredicted RBP14.01□□□□□ -0.17
PDE6B-212ENST00000496514 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
PDE6B-212ENST00000496514 BAG3O95817 575 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 RASA1P20936 1047 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 MKRN1Q9UHC7 482 aaKnown RBP14.01□□□□□ -0.17
PDE6B-212ENST00000496514 MAD2L2Q9UI95 211 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 CTNND2Q9UQB3 1225 aa14.01□□□□□ -0.17
PDE6B-212ENST00000496514 FGRP09769 529 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CDK8P49336 464 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 ST5P78524 1137 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 PFKFB3Q16875 520 aaPredicted RBP14□□□□□ -0.17
PDE6B-212ENST00000496514 SHROOM1Q2M3G4 852 aaPredicted RBP14□□□□□ -0.17
PDE6B-212ENST00000496514 GPIHBP1Q8IV16 184 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 PPP1R13BQ96KQ4 1090 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 EYA3Q99504 573 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 BPIFA3Q9BQP9 254 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 ZNF215Q9UL58 517 aaPredicted RBP14□□□□□ -0.17
PDE6B-212ENST00000496514 A0A1B0GUL6 1792 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 IKBKBO14920 756 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CALM1P0DP23 149 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CALM2P0DP24 149 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CALM3P0DP25 149 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CBX1P83916 185 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 MORC3Q14149 939 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 MTF1Q14872 753 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 MTRQ99707 1265 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 NID2Q14112 1375 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 A0A0U1RQJ8 604 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 FAM237AA0A1B0GTK4 181 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 SMAP1Q8IYB5 467 aaPredicted RBP14□□□□□ -0.17
PDE6B-212ENST00000496514 BLIDQ8IZY5 108 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 TBC1D16Q8TBP0 767 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 CEP95Q96GE4 821 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 OSBPL5Q9H0X9 879 aaPredicted RBP14□□□□□ -0.17
PDE6B-212ENST00000496514 GDAQ9Y2T3 454 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 LEMD3Q9Y2U8 911 aa14□□□□□ -0.17
PDE6B-212ENST00000496514 KLRF2D3W0D1 207 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 ERCC3P19447 782 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 JAKMIP3Q5VZ66 844 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 GJA10Q969M2 543 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
PDE6B-212ENST00000496514 CCDC194A0A1B0GVG4 234 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 PES1O00541 588 aaKnown RBP13.99□□□□□ -0.17
PDE6B-212ENST00000496514 LETM2Q2VYF4 491 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 AMOTL1Q8IY63 956 aa13.99□□□□□ -0.17
PDE6B-212ENST00000496514 USP17L5A8MUK1 530 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 KIF5BP33176 963 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 GSDMDP57764 484 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 RRAGBQ5VZM2 374 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 GPCPD1Q9NPB8 672 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 TMEM260Q9NX78 707 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 BIN2Q9UBW5 565 aaPredicted RBP13.98□□□□□ -0.17
PDE6B-212ENST00000496514 FLT1P17948 1338 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 TRIM49BA6NDI0 452 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 NCBP1Q09161 790 aaKnown RBP13.98□□□□□ -0.17
PDE6B-212ENST00000496514 SBK1Q52WX2 424 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 PIGSQ96S52 555 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 DNAI1Q9UI46 699 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 SARSP49591 514 aaKnown RBP13.98□□□□□ -0.17
PDE6B-212ENST00000496514 NAPAP54920 295 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 TCP10Q12799 353 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 PROM2Q8N271 834 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 COA7Q96BR5 231 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 DBNDD1Q9H9R9 158 aa13.98□□□□□ -0.17
PDE6B-212ENST00000496514 SLFN14P0C7P3 912 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
PDE6B-212ENST00000496514 VPS16Q9H269 839 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 MPHOSPH10O00566 681 aaKnown RBP13.97□□□□□ -0.17
PDE6B-212ENST00000496514 SLC16A2P36021 539 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 NYAP1Q6ZVC0 841 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 CNPY4Q8N129 248 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 HPS3Q969F9 1004 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 RBM17Q96I25 401 aaKnown RBP13.97□□□□□ -0.17
PDE6B-212ENST00000496514 MTA3Q9BTC8 594 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 DDX4Q9NQI0 724 aaKnown RBP13.97□□□□□ -0.17
PDE6B-212ENST00000496514 PCDHA6Q9UN73 950 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 PCDHA8Q9Y5H6 950 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 SYNRGQ9UMZ2 1314 aa13.97□□□□□ -0.17
PDE6B-212ENST00000496514 TOGARAM2Q6ZUX3 1019 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 PDCL2Q8N4E4 241 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 CERS5Q8N5B7 392 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 CCDC150Q8NCX0 1101 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.17
PDE6B-212ENST00000496514 IRX2Q9BZI1 471 aaPredicted RBP13.96□□□□□ -0.17
PDE6B-212ENST00000496514 G3V3G9 751 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 RCAN1P53805 252 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 DCAF8Q5TAQ9 597 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 LRRC15Q8TF66 581 aa13.96□□□□□ -0.17
PDE6B-212ENST00000496514 FANCGO15287 622 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 NEMFO60524 1076 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 IGSF3O75054 1194 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 AKR1B1P15121 316 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 TAL1P17542 331 aaPredicted RBP13.96□□□□□ -0.18
PDE6B-212ENST00000496514 RHBDL3P58872 404 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 ELF2Q15723 593 aa13.96□□□□□ -0.18
PDE6B-212ENST00000496514 DPP8Q6V1X1 898 aaPredicted RBP13.96□□□□□ -0.18
PDE6B-212ENST00000496514 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.18
PDE6B-212ENST00000496514 EPC1Q9H2F5 836 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms