RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 MBNL3Q9NUK0 354 aaKnown RBP3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 GFRA2O00451 464 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 FAM160A1Q05DH4 1040 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 ANKRD24Q8TF21 1146 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 FBXL18Q96ME1 805 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 ERCC6Q03468 1493 aa3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.59□□□□□ -1.83
CDC42EP3-205ENST00000494083 ALS2Q96Q42 1657 aa3.59□□□□□ -1.84
CDC42EP3-205ENST00000494083 GIPC1O14908 333 aa3.59□□□□□ -1.84
CDC42EP3-205ENST00000494083 CDKAL1Q5VV42 579 aa3.59□□□□□ -1.84
CDC42EP3-205ENST00000494083 ATP13A1Q9HD20 1204 aa3.59□□□□□ -1.84
CDC42EP3-205ENST00000494083 SAMM50Q9Y512 469 aa3.59□□□□□ -1.84
CDC42EP3-205ENST00000494083 LRRC14Q15048 493 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 ARHGAP27Q6ZUM4 889 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 SV2BQ7L1I2 683 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 CDC37L1Q7L3B6 337 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 LRRN4CLQ8ND94 238 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 WNT10AQ9GZT5 417 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 COPRSQ9NQ92 184 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 TPX2Q9ULW0 747 aaKnown RBP3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 ERBINQ96RT1 1412 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 GRIN3BO60391 1043 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 DNAJA2O60884 412 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 IFI16Q16666 785 aaKnown RBP3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 CCDC27Q2M243 656 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 OGFOD2Q6N063 350 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 PHC3Q8NDX5 983 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 FBXO27Q8NI29 283 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 PRDM5Q9NQX1 630 aaPredicted RBP3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 TJP2Q9UDY2 1190 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZBED9Q6R2W3 1325 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 CCDC7Q96M83 1385 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 NEXMIFQ5QGS0 1516 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 CARMIL2Q6F5E8 1435 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 NPC1L1Q9UHC9 1359 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF521Q96K83 1311 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 UPK3BL1B0FP48 263 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 UPK3BL2E5RIL1 263 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 LRIG2O94898 1065 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 FGD1P98174 961 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 LETMD1Q6P1Q0 360 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 HDXQ7Z353 690 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 TMC4Q7Z404 712 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 HRASLS5Q96KN8 279 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 MIR1-1HGQ9H1L0 117 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 TNKS2Q9H2K2 1166 aa3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 RC3H2Q9HBD1 1191 aaKnown RBP3.58□□□□□ -1.84
CDC42EP3-205ENST00000494083 F13A1P00488 732 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 CDH24Q86UP0 819 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZNF428Q96B54 188 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ACSF2Q96CM8 615 aaPredicted RBP3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 CRELD1Q96HD1 420 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 PIK3C2AO00443 1686 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 PRAG1Q86YV5 1406 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 H3BS24 57 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 FUT4P22083 530 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 XPCQ01831 940 aaPredicted RBP3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ATP7AQ04656 1500 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ARHGEF40Q8TER5 1519 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 A2MP01023 1474 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 PLB1Q6P1J6 1458 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 CARMIL1Q5VZK9 1371 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 PGRP06401 933 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ITGB5P18084 799 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 PRKCQQ04759 706 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 TAF1CQ15572 869 aaPredicted RBP3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 AGBL5Q8NDL9 886 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 HSPA12BQ96MM6 686 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 VTI1BQ9UEU0 232 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 ECM29Q5VYK3 1845 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 LMTK3Q96Q04 1460 aa3.57□□□□□ -1.84
CDC42EP3-205ENST00000494083 KDM2BQ8NHM5 1336 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 PITPNM2Q9BZ72 1349 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 SORBS3O60504 671 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 CBX7O95931 251 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 LMNB1P20700 586 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 FMNL2Q96PY5 1086 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 MED14O60244 1454 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 PHLPP1O60346 1717 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 CACNA1FO60840 1977 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 KANK1Q14678 1352 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 CASZ1Q86V15 1759 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 ASXL1Q8IXJ9 1541 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 MINDY4BA8MYZ0 360 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 PF4P02776 101 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 HNRNPUQ00839 825 aaKnown RBP eCLIP3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 IKZF1Q13422 519 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 MFSD4AQ8N468 514 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 RHOVQ96L33 236 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 FOXQ1Q9C009 403 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 KBTBD4Q9NVX7 518 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 IBTKQ9P2D0 1353 aaPredicted RBP3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 FAM221AA4D161 298 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 CRKP46108 304 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 RPS26P62854 115 aaKnown RBP3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 ZP2Q05996 745 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 FYB2Q5VWT5 728 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 HID1Q8IV36 788 aa3.56□□□□□ -1.84
CDC42EP3-205ENST00000494083 GIPC2Q8TF65 315 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms