RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 FCER1AP12319 257 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 GNAT2P19087 354 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 LRRC26Q2I0M4 334 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 TTC41PQ6P2S7 1318 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 MKNK2Q9HBH9 465 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 ADAMTS5Q9UNA0 930 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 MYH4Q9Y623 1939 aa19.89■□□□□ 0.77
PTPRU-208ENST00000493601 ZNFX1Q9P2E3 1918 aaKnown RBP19.88■□□□□ 0.77
PTPRU-208ENST00000493601 PLXNA1Q9UIW2 1896 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 DNM1LO00429 736 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 ERC2O15083 957 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 GPAA1O43292 621 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 COBLO75128 1261 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 RASA1P20936 1047 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 MAGEA10P43363 369 aaPredicted RBP19.88■□□□□ 0.77
PTPRU-208ENST00000493601 TDO2P48775 406 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 TMEM132BQ14DG7 1078 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 TRPV1Q8NER1 839 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 ZNF287Q9HBT7 754 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 PPP1R9AQ9ULJ8 1098 aa19.88■□□□□ 0.77
PTPRU-208ENST00000493601 MINDY4BA8MYZ0 360 aa19.87■□□□□ 0.77
PTPRU-208ENST00000493601 COPB2P35606 906 aa19.87■□□□□ 0.77
PTPRU-208ENST00000493601 FAM83BQ5T0W9 1011 aa19.87■□□□□ 0.77
PTPRU-208ENST00000493601 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.87■□□□□ 0.77
PTPRU-208ENST00000493601 FBXO28Q9NVF7 368 aa19.87■□□□□ 0.77
PTPRU-208ENST00000493601 VWA5AO00534 786 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 SEPT4O43236 478 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 RIOX2Q8IUF8 465 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 ARRDC4Q8NCT1 418 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 MAML3Q96JK9 1138 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 MMP19Q99542 508 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 SENP6Q9GZR1 1112 aaPredicted RBP19.86■□□□□ 0.77
PTPRU-208ENST00000493601 EPB41L4AQ9HCS5 686 aaPredicted RBP19.86■□□□□ 0.77
PTPRU-208ENST00000493601 NYAP2Q9P242 653 aa19.86■□□□□ 0.77
PTPRU-208ENST00000493601 M0R2C6 588 aa19.85■□□□□ 0.77
PTPRU-208ENST00000493601 SOX1O00570 391 aaPredicted RBP19.85■□□□□ 0.77
PTPRU-208ENST00000493601 APPP05067 770 aa19.85■□□□□ 0.77
PTPRU-208ENST00000493601 STK11IPQ8N1F8 1099 aa19.85■□□□□ 0.77
PTPRU-208ENST00000493601 KBTBD13C9JR72 458 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 STAT3P40763 770 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 KCTD2Q14681 263 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 TDHQ8IZJ6 230 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 SLF1Q9BQI6 1058 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 NACAP1Q9BZK3 213 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 UBE2OQ9C0C9 1292 aaKnown RBP19.84■□□□□ 0.77
PTPRU-208ENST00000493601 NRBP1Q9UHY1 535 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 ZNF214Q9UL59 606 aaPredicted RBP19.84■□□□□ 0.77
PTPRU-208ENST00000493601 PCDHB15Q9Y5E8 787 aa19.84■□□□□ 0.77
PTPRU-208ENST00000493601 ZNF444Q8N0Y2 327 aaPredicted RBP19.83■□□□□ 0.77
PTPRU-208ENST00000493601 REPS2Q8NFH8 660 aa19.83■□□□□ 0.77
PTPRU-208ENST00000493601 PI4K2BQ8TCG2 481 aa19.83■□□□□ 0.77
PTPRU-208ENST00000493601 LRCH3Q96II8 777 aa19.83■□□□□ 0.77
PTPRU-208ENST00000493601 FSD1Q9BTV5 496 aa19.83■□□□□ 0.77
PTPRU-208ENST00000493601 SYNPO2Q9UMS6 1093 aa19.83■□□□□ 0.77
PTPRU-208ENST00000493601 PLIN4Q96Q06 1357 aa19.83■□□□□ 0.76
PTPRU-208ENST00000493601 PATL2C9JE40 543 aaKnown RBP19.82■□□□□ 0.76
PTPRU-208ENST00000493601 F5H6K3 240 aa19.82■□□□□ 0.76
PTPRU-208ENST00000493601 NDUFB10O96000 172 aa19.82■□□□□ 0.76
PTPRU-208ENST00000493601 MX1P20591 662 aa19.82■□□□□ 0.76
PTPRU-208ENST00000493601 KLRC3Q07444 240 aa19.82■□□□□ 0.76
PTPRU-208ENST00000493601 GJC2Q5T442 439 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-208ENST00000493601 NUP88Q99567 741 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-208ENST00000493601 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
PTPRU-208ENST00000493601 DIS3Q9Y2L1 958 aaKnown RBP19.82■□□□□ 0.76
PTPRU-208ENST00000493601 LTBP2Q14767 1821 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 IGKV6D-41A0A0C4DH26 115 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 PGK2P07205 417 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 SLC3A2P08195 630 aaKnown RBP19.81■□□□□ 0.76
PTPRU-208ENST00000493601 ATN1P54259 1190 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-208ENST00000493601 RRP1P56182 461 aaKnown RBP19.81■□□□□ 0.76
PTPRU-208ENST00000493601 LRIT3Q3SXY7 679 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 ANO1Q5XXA6 986 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 GPR153Q6NV75 609 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 IFNL3Q8IZI9 196 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 PRPF38AQ8NAV1 312 aaKnown RBP19.81■□□□□ 0.76
PTPRU-208ENST00000493601 CLIP2Q9UDT6 1046 aa19.81■□□□□ 0.76
PTPRU-208ENST00000493601 ZBTB47Q9UFB7 747 aaPredicted RBP19.81■□□□□ 0.76
PTPRU-208ENST00000493601 PRDM1O75626 825 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 TTLL1O95922 423 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 RTP1P59025 263 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 PDE4BQ07343 736 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 ZNF792Q3KQV3 632 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 PRAMEF19Q5SWL8 479 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 SNRNP48Q6IEG0 339 aaKnown RBP19.8■□□□□ 0.76
PTPRU-208ENST00000493601 OTUD7AQ8TE49 926 aaPredicted RBP19.8■□□□□ 0.76
PTPRU-208ENST00000493601 CEP95Q96GE4 821 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 LBHD1Q9BQE6 289 aaPredicted RBP19.8■□□□□ 0.76
PTPRU-208ENST00000493601 TINF2Q9BSI4 451 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 NAPBQ9H115 298 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 MTMR4Q9NYA4 1195 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 PRKAG2Q9UGJ0 569 aa19.8■□□□□ 0.76
PTPRU-208ENST00000493601 COL6A3P12111 3177 aa19.79■□□□□ 0.76
PTPRU-208ENST00000493601 LAMA2P24043 3122 aaKnown RBP19.79■□□□□ 0.76
PTPRU-208ENST00000493601 MYCNP04198 464 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-208ENST00000493601 MDM2Q00987 491 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-208ENST00000493601 ZMYM1Q5SVZ6 1142 aa19.79■□□□□ 0.76
PTPRU-208ENST00000493601 MKL1Q969V6 931 aa19.79■□□□□ 0.76
PTPRU-208ENST00000493601 SEC62Q99442 399 aaKnown RBP19.79■□□□□ 0.76
PTPRU-208ENST00000493601 CTDP1Q9Y5B0 961 aaPredicted RBP19.79■□□□□ 0.76
PTPRU-208ENST00000493601 ATP2A1O14983 1001 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms