RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 PDE4BQ07343 736 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 PLS1Q14651 629 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 CCL14Q16627 93 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 LHX8Q68G74 356 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 FAM109BQ6ICB4 259 aaPredicted RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 Q7L0L9 218 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 NCAPG2Q86XI2 1143 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 RIOX2Q8IUF8 465 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 ZNF444Q8N0Y2 327 aaPredicted RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 NYAP2Q9P242 653 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 DDX20Q9UHI6 824 aaKnown RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 ZMYND8Q9ULU4 1186 aaPredicted RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 ADAMTS5Q9UNA0 930 aa10.45□□□□□ -0.74
NUP50-217ENST00000491860 DIS3Q9Y2L1 958 aaKnown RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 GREB1LQ9C091 1923 aaPredicted RBP10.45□□□□□ -0.74
NUP50-217ENST00000491860 FRMPD3Q5JV73 1810 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 GSG1L2A8MUP6 293 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 PATL2C9JE40 543 aaKnown RBP10.44□□□□□ -0.74
NUP50-217ENST00000491860 DNM1LO00429 736 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 APPP05067 770 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 FDX1P10109 184 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 CNGA1P29973 690 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 EVX2Q03828 476 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 KCTD2Q14681 263 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 SIAH1Q8IUQ4 282 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 SPICE1Q8N0Z3 855 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 MSL3Q8N5Y2 521 aaKnown RBP10.44□□□□□ -0.74
NUP50-217ENST00000491860 OSBP2Q969R2 916 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 COL25A1Q9BXS0 654 aaPredicted RBP10.44□□□□□ -0.74
NUP50-217ENST00000491860 PPP1R9AQ9ULJ8 1098 aa10.44□□□□□ -0.74
NUP50-217ENST00000491860 CTDP1Q9Y5B0 961 aaPredicted RBP10.44□□□□□ -0.74
NUP50-217ENST00000491860 ZNFX1Q9P2E3 1918 aaKnown RBP10.44□□□□□ -0.74
NUP50-217ENST00000491860 MYH4Q9Y623 1939 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 PFASO15067 1338 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 CYP2D7A0A087X1C5 515 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 MINDY4BA8MYZ0 360 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 KBTBD13C9JR72 458 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 VWA5AO00534 786 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 SEPT4O43236 478 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 IGHA2P01877 340 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 CYBAP13498 195 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 MX1P20591 662 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 RASA1P20936 1047 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 STAT3P40763 770 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 RRP1P56182 461 aaKnown RBP10.43□□□□□ -0.74
NUP50-217ENST00000491860 SLFNL1Q499Z3 407 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 PRPF38AQ8NAV1 312 aaKnown RBP10.43□□□□□ -0.74
NUP50-217ENST00000491860 ATG4CQ96DT6 458 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 MMP19Q99542 508 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 SLF1Q9BQI6 1058 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 FSD1Q9BTV5 496 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 UBE2OQ9C0C9 1292 aaKnown RBP10.43□□□□□ -0.74
NUP50-217ENST00000491860 NAPBQ9H115 298 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 FLRT1Q9NZU1 646 aa10.43□□□□□ -0.74
NUP50-217ENST00000491860 LAMA2P24043 3122 aaKnown RBP10.42□□□□□ -0.74
NUP50-217ENST00000491860 COL11A1P12107 1806 aaPredicted RBP10.42□□□□□ -0.74
NUP50-217ENST00000491860 PLIN4Q96Q06 1357 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 POTEB2H3BUK9 544 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 ATP2A1O14983 1001 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 RAD21O60216 631 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 ZBED4O75132 1171 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 TTLL1O95922 423 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 SYN1P17600 705 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 CYP2C19P33261 490 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 TMEM132BQ14DG7 1078 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 CLEC10AQ8IUN9 316 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.42□□□□□ -0.74
NUP50-217ENST00000491860 IFNL3Q8IZI9 196 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 NPLOC4Q8TAT6 608 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 PI4K2BQ8TCG2 481 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 MKL1Q969V6 931 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 MAML3Q96JK9 1138 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 TEX13BQ9BXU2 312 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 PRKAG2Q9UGJ0 569 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 FBXO40Q9UH90 709 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 FEM1BQ9UK73 627 aa10.42□□□□□ -0.74
NUP50-217ENST00000491860 PLXNA1Q9UIW2 1896 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 F5H6K3 240 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 TSPY3P0CV98 308 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 TSPY8P0CW00 308 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 OAZ1P54368 228 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 KLRC3Q07444 240 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 HDAC1Q13547 482 aaPredicted RBP10.41□□□□□ -0.74
NUP50-217ENST00000491860 KIAA1755Q5JYT7 1200 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 ZMYM1Q5SVZ6 1142 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 FAM83BQ5T0W9 1011 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 SAMD1Q6SPF0 538 aaPredicted RBP10.41□□□□□ -0.74
NUP50-217ENST00000491860 GMCL1P1Q8NEA9 526 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 EVI5LQ96CN4 794 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 SENP6Q9GZR1 1112 aaPredicted RBP10.41□□□□□ -0.74
NUP50-217ENST00000491860 MTMR4Q9NYA4 1195 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 CLIP2Q9UDT6 1046 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 PCDHB15Q9Y5E8 787 aa10.41□□□□□ -0.74
NUP50-217ENST00000491860 IGKV6D-41A0A0C4DH26 115 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 M0R2C6 588 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 COBLO75128 1261 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 NDUFB10O96000 172 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 CHGBP05060 677 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 RARBP10826 455 aa10.4□□□□□ -0.74
NUP50-217ENST00000491860 NT5C2P49902 561 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms