RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 MYOZ2Q9NPC6 264 aa8.13□□□□□ -1.11
SF3A3-206ENST00000487062 RTEL1Q9NZ71 1219 aa8.13□□□□□ -1.11
SF3A3-206ENST00000487062 MAD2L2Q9UI95 211 aa8.13□□□□□ -1.11
SF3A3-206ENST00000487062 RCOR1Q9UKL0 485 aa8.13□□□□□ -1.11
SF3A3-206ENST00000487062 V9GY48 417 aaPredicted RBP8.13□□□□□ -1.11
SF3A3-206ENST00000487062 SBF1O95248 1867 aa8.13□□□□□ -1.11
SF3A3-206ENST00000487062 CLRN2A0PK11 232 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 PALM3A6NDB9 673 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 KLRF2D3W0D1 207 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 YEATS4O95619 227 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 SCG2P13521 617 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 CALML3P27482 149 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 GUCY1A2P33402 732 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 KRT2P35908 639 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 ZNF280AP59817 542 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 TNFAIP1Q13829 316 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 STK38Q15208 465 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 SF3A1Q15459 793 aaKnown RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 PKN1Q16512 942 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 PFKFB3Q16875 520 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 ABCB5Q2M3G0 1257 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 L1TD1Q5T7N2 865 aaKnown RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 ARHGAP27Q6ZUM4 889 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 TMEM179Q6ZVK1 233 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 NOSTRINQ8IVI9 506 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 DIS3L2Q8IYB7 885 aaKnown RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 KCNG4Q8TDN1 519 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 CCDC12Q8WUD4 166 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 ZBED3Q96IU2 234 aaPredicted RBP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 USP28Q96RU2 1077 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 SPZ1Q9BXG8 430 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 KANSL2Q9H9L4 492 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.12□□□□□ -1.11
SF3A3-206ENST00000487062 SH3GLB2Q9NR46 395 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 GJB4Q9NTQ9 266 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 POLR3EQ9NVU0 708 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 NYAP2Q9P242 653 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 CLIP2Q9UDT6 1046 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 MTMR7Q9Y216 660 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 GJA3Q9Y6H8 435 aa8.12□□□□□ -1.11
SF3A3-206ENST00000487062 GOLGA6L3A6NEY3 463 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 KIF28PB7ZC32 967 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 hCG_1984214I3L0E3 225 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 WNT10BO00744 389 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 LMNB1P20700 586 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 DEKP35659 375 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ME1P48163 572 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 NASPP49321 788 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 GMPSP49915 693 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 NLRP5P59047 1200 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ZNF445P59923 1031 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ATP2B2Q01814 1243 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CEBPZQ03701 1054 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ZSCAN23Q3MJ62 389 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 RILPL1Q5EBL4 403 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 GPATCH4Q5T3I0 446 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CCDC183Q5T5S1 534 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ANO1Q5XXA6 986 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 GALNT17Q6IS24 598 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CHADLQ6NUI6 762 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 SH3BP5LQ7L8J4 393 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 STAG2Q8N3U4 1231 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 ZNF713Q8N859 430 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 JMYQ8N9B5 988 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CCDC148Q8NFR7 591 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 BICD2Q8TD16 824 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 MKL1Q969V6 931 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 RRP36Q96EU6 259 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 PHF20Q9BVI0 1012 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 FHDC1Q9C0D6 1143 aaPredicted RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 DNAJC18Q9H819 358 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 VPS54Q9P1Q0 977 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 SEC63Q9UGP8 760 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 NOL7Q9UMY1 257 aaKnown RBP8.11□□□□□ -1.11
SF3A3-206ENST00000487062 KCNJ14Q9UNX9 436 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CEP131Q9UPN4 1083 aa8.11□□□□□ -1.11
SF3A3-206ENST00000487062 CNTNAP1P78357 1384 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 ATAD5Q96QE3 1844 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 BTBD18B2RXH4 712 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 UBE2Q2LH0YL09 131 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 H7C1D1 291 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 SPTLC2O15270 562 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 TBC1D12O60347 775 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 SNHG28P0DPA3 235 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 PDHBP11177 359 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 ICA1Q05084 483 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 CCDC96Q2M329 555 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 NBPF9Q3BBW0 867 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 ADALQ6DHV7 355 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 USP17L2Q6R6M4 530 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 CCDC73Q6ZRK6 1079 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 LRRC47Q8N1G4 583 aaKnown RBP8.1□□□□□ -1.11
SF3A3-206ENST00000487062 LINC00301Q8NCQ3 95 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 DCAF4Q8WV16 495 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 FAM117AQ9C073 453 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 ARHGEF10LQ9HCE6 1279 aa8.1□□□□□ -1.11
SF3A3-206ENST00000487062 DDX19AQ9NUU7 478 aaKnown RBP8.1□□□□□ -1.11
SF3A3-206ENST00000487062 TMEM63CQ9P1W3 806 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms