RNA–Protein interactions for RNA: ENST00000486336.1

SNX21-211, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-211ENST00000486336 NDUFB10O96000 172 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 GJB1P08034 283 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 ZKSCAN1P17029 563 aaPredicted RBP13.08□□□□□ -0.32
SNX21-211ENST00000486336 PTPREP23469 700 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 SLC4A3P48751 1232 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 TTC22Q5TAA0 569 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 MB21D1Q8N884 522 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 TRIB2Q92519 343 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 DEFB118Q96PH6 123 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 MTMR7Q9Y216 660 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 CENPFP49454 3210 aa13.08□□□□□ -0.32
SNX21-211ENST00000486336 ERCC3P19447 782 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 GJA8P48165 433 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 MAP2K5Q13163 448 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 CCL14Q16627 93 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 SLFN13Q68D06 897 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 DPP9Q86TI2 863 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 TRMT44Q8IYL2 757 aaKnown RBP13.07□□□□□ -0.32
SNX21-211ENST00000486336 U2AF1L4Q8WU68 220 aaKnown RBP13.07□□□□□ -0.32
SNX21-211ENST00000486336 MKL1Q969V6 931 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 SLF1Q9BQI6 1058 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 HMX1Q9NP08 348 aaPredicted RBP13.07□□□□□ -0.32
SNX21-211ENST00000486336 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 PPP1R9AQ9ULJ8 1098 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 STX8Q9UNK0 236 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNX21-211ENST00000486336 TACC3Q9Y6A5 838 aa13.07□□□□□ -0.32
SNX21-211ENST00000486336 VWA5AO00534 786 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 NMT2O60551 498 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 SGPL1O95470 568 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 XRCC5P13010 732 aaKnown RBP13.06□□□□□ -0.32
SNX21-211ENST00000486336 IKQ13123 557 aaPredicted RBP13.06□□□□□ -0.32
SNX21-211ENST00000486336 TMEM132BQ14DG7 1078 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 MFSD6Q6ZSS7 791 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 USP6NLQ92738 828 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 KIFC2Q96AC6 838 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 SHISA4Q96DD7 197 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 APBA2Q99767 749 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.06□□□□□ -0.32
SNX21-211ENST00000486336 RPTORQ8N122 1335 aa13.06□□□□□ -0.32
SNX21-211ENST00000486336 PLXNB2O15031 1838 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 ZNF213O14771 459 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 STRNO43815 780 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 ORC4O43929 436 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 ZBED4O75132 1171 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 BMP3P12645 472 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 PRKAR2AP13861 404 aaKnown RBP13.05□□□□□ -0.32
SNX21-211ENST00000486336 GSPT1P15170 499 aaKnown RBP13.05□□□□□ -0.32
SNX21-211ENST00000486336 STAT3P40763 770 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 MFSD14CQ5VZR4 134 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 SHCBP1Q8NEM2 672 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 NPLOC4Q8TAT6 608 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 MROH8Q9H579 483 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 IL17RBQ9NRM6 502 aa13.05□□□□□ -0.32
SNX21-211ENST00000486336 RBBP6Q7Z6E9 1792 aaKnown RBP13.04□□□□□ -0.32
SNX21-211ENST00000486336 GREB1LQ9C091 1923 aaPredicted RBP13.04□□□□□ -0.32
SNX21-211ENST00000486336 MYH4Q9Y623 1939 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 TMEM232C9JQI7 657 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 SLC25A27O95847 323 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 FCER1AP12319 257 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 MCCP23508 829 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 ADORA2AP29274 412 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 SLC1A4P43007 532 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 CACNB2Q08289 660 aaPredicted RBP13.04□□□□□ -0.32
SNX21-211ENST00000486336 GRB14Q14449 540 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 AKNAD1Q5T1N1 836 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 CPXCR1Q8N123 301 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 PRPF38AQ8NAV1 312 aaKnown RBP13.04□□□□□ -0.32
SNX21-211ENST00000486336 GMCL1P1Q8NEA9 526 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 SLC5A4Q9NY91 659 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 FEM1BQ9UK73 627 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 ADAMTS5Q9UNA0 930 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 PLIN4Q96Q06 1357 aa13.04□□□□□ -0.32
SNX21-211ENST00000486336 RLFQ13129 1914 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 FARP2O94887 1054 aaPredicted RBP13.03□□□□□ -0.32
SNX21-211ENST00000486336 CNGA1P29973 690 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 CCDC96Q2M329 555 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 KCTD1Q719H9 257 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 RIOX2Q8IUF8 465 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 TBC1D10CQ8IV04 446 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 RUFY2Q8WXA3 655 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 DPF3Q92784 378 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 MMP19Q99542 508 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 RNF41Q9H4P4 317 aaPredicted RBP13.03□□□□□ -0.32
SNX21-211ENST00000486336 RAVER2Q9HCJ3 691 aaKnown RBP13.03□□□□□ -0.32
SNX21-211ENST00000486336 PAK6Q9NQU5 681 aaPredicted RBP13.03□□□□□ -0.32
SNX21-211ENST00000486336 FLRT1Q9NZU1 646 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 SYNPO2Q9UMS6 1093 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 PDE4DIPQ5VU43 2346 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 ZMYM6O95789 1325 aa13.03□□□□□ -0.32
SNX21-211ENST00000486336 TNRC18O15417 2968 aaPredicted RBP13.02□□□□□ -0.32
SNX21-211ENST00000486336 COBLO75128 1261 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 FGRP09769 529 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 CCND3P30281 292 aaPredicted RBP13.02□□□□□ -0.33
SNX21-211ENST00000486336 CYP2C19P33261 490 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 IMMTQ16891 758 aaKnown RBP13.02□□□□□ -0.33
SNX21-211ENST00000486336 SNRNP48Q6IEG0 339 aaKnown RBP13.02□□□□□ -0.33
SNX21-211ENST00000486336 REPS2Q8NFH8 660 aa13.02□□□□□ -0.33
SNX21-211ENST00000486336 CHURC1Q8WUH1 139 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms