RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 APPP05067 770 aa23.69■■□□□ 1.38
HPS4-213ENST00000483631 OLFML2BQ68BL8 750 aa23.69■■□□□ 1.38
HPS4-213ENST00000483631 LHX8Q68G74 356 aa23.69■■□□□ 1.38
HPS4-213ENST00000483631 DIS3LQ8TF46 1054 aaKnown RBP23.69■■□□□ 1.38
HPS4-213ENST00000483631 C11orf49Q9H6J7 331 aa23.69■■□□□ 1.38
HPS4-213ENST00000483631 IGKV6D-41A0A0C4DH26 115 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 ADORA2AP29274 412 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 CCND3P30281 292 aaPredicted RBP23.68■■□□□ 1.38
HPS4-213ENST00000483631 COPB2P35606 906 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 ANKRD45Q5TZF3 282 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 DPP9Q86TI2 863 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 ZNF444Q8N0Y2 327 aaPredicted RBP23.68■■□□□ 1.38
HPS4-213ENST00000483631 NPLOC4Q8TAT6 608 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 FLRT1Q9NZU1 646 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 PPP1R9AQ9ULJ8 1098 aa23.68■■□□□ 1.38
HPS4-213ENST00000483631 PLIN4Q96Q06 1357 aa23.67■■□□□ 1.38
HPS4-213ENST00000483631 SLC3A2P08195 630 aaKnown RBP23.67■■□□□ 1.38
HPS4-213ENST00000483631 CHRDL2Q6WN34 429 aa23.67■■□□□ 1.38
HPS4-213ENST00000483631 MKL1Q969V6 931 aa23.67■■□□□ 1.38
HPS4-213ENST00000483631 EVI5LQ96CN4 794 aa23.67■■□□□ 1.38
HPS4-213ENST00000483631 PRO3102Q9H379 93 aa23.67■■□□□ 1.38
HPS4-213ENST00000483631 PDE4BQ07343 736 aa23.66■■□□□ 1.38
HPS4-213ENST00000483631 PLS1Q14651 629 aa23.66■■□□□ 1.38
HPS4-213ENST00000483631 TMEM132BQ14DG7 1078 aa23.66■■□□□ 1.38
HPS4-213ENST00000483631 RIOX2Q8IUF8 465 aa23.66■■□□□ 1.38
HPS4-213ENST00000483631 SEC62Q99442 399 aaKnown RBP23.66■■□□□ 1.38
HPS4-213ENST00000483631 NAPBQ9H115 298 aa23.66■■□□□ 1.38
HPS4-213ENST00000483631 A0A1W2PPC1 479 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 VWA5AO00534 786 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 COL6A1P12109 1028 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 FXR1P51114 621 aaKnown RBP eCLIP23.65■■□□□ 1.38
HPS4-213ENST00000483631 PDE1AP54750 535 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 FAM83BQ5T0W9 1011 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 NCAPG2Q86XI2 1143 aa23.65■■□□□ 1.38
HPS4-213ENST00000483631 F5H6K3 240 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 FCER1AP12319 257 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 CYBAP13498 195 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 KLRC3Q07444 240 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 PPP4R3BQ5MIZ7 849 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 FBXO28Q9NVF7 368 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 MTMR4Q9NYA4 1195 aa23.64■■□□□ 1.37
HPS4-213ENST00000483631 DDX20Q9UHI6 824 aaKnown RBP23.64■■□□□ 1.37
HPS4-213ENST00000483631 TTLL1O95922 423 aa23.63■■□□□ 1.37
HPS4-213ENST00000483631 STAT3P40763 770 aa23.63■■□□□ 1.37
HPS4-213ENST00000483631 REPS2Q8NFH8 660 aa23.63■■□□□ 1.37
HPS4-213ENST00000483631 NEDD1Q8NHV4 660 aa23.63■■□□□ 1.37
HPS4-213ENST00000483631 SLF1Q9BQI6 1058 aa23.63■■□□□ 1.37
HPS4-213ENST00000483631 ZNF214Q9UL59 606 aaPredicted RBP23.63■■□□□ 1.37
HPS4-213ENST00000483631 PFASO15067 1338 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 COBLO75128 1261 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 NDUFB10O96000 172 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 CYP2C19P33261 490 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 PPARAQ07869 468 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 STK11IPQ8N1F8 1099 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 PRPF38AQ8NAV1 312 aaKnown RBP23.62■■□□□ 1.37
HPS4-213ENST00000483631 GMCL1P1Q8NEA9 526 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 CEP95Q96GE4 821 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 HELLSQ9NRZ9 838 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 RBM27Q9P2N5 1060 aaKnown RBP23.62■■□□□ 1.37
HPS4-213ENST00000483631 CLIP2Q9UDT6 1046 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 NRBP1Q9UHY1 535 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 DIS3Q9Y2L1 958 aaKnown RBP23.62■■□□□ 1.37
HPS4-213ENST00000483631 PLXNA1Q9UIW2 1896 aa23.62■■□□□ 1.37
HPS4-213ENST00000483631 ATP2A1O14983 1001 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 RAD21O60216 631 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 PRDM1O75626 825 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 TSPY3P0CV98 308 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 TSPY8P0CW00 308 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 SMC5Q8IY18 1101 aa23.61■■□□□ 1.37
HPS4-213ENST00000483631 RWDD1Q9H446 243 aaPredicted RBP23.61■■□□□ 1.37
HPS4-213ENST00000483631 MAML3Q96JK9 1138 aa23.6■■□□□ 1.37
HPS4-213ENST00000483631 MMP19Q99542 508 aa23.6■■□□□ 1.37
HPS4-213ENST00000483631 TEX13BQ9BXU2 312 aa23.6■■□□□ 1.37
HPS4-213ENST00000483631 ANAPC4Q9UJX5 808 aa23.6■■□□□ 1.37
HPS4-213ENST00000483631 SEPT4O43236 478 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 FDX1P10109 184 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 CNGA1P29973 690 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 KCTD2Q14681 263 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 ALX1Q15699 326 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 SAMD1Q6SPF0 538 aaPredicted RBP23.59■■□□□ 1.37
HPS4-213ENST00000483631 TRPV1Q8NER1 839 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 YTHDC1Q96MU7 727 aaKnown RBP23.59■■□□□ 1.37
HPS4-213ENST00000483631 FEM1BQ9UK73 627 aa23.59■■□□□ 1.37
HPS4-213ENST00000483631 RANBP2P49792 3224 aaKnown RBP23.59■■□□□ 1.37
HPS4-213ENST00000483631 DNM1LO00429 736 aa23.58■■□□□ 1.37
HPS4-213ENST00000483631 FOXP2O15409 715 aa23.58■■□□□ 1.37
HPS4-213ENST00000483631 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.58■■□□□ 1.37
HPS4-213ENST00000483631 C7orf61Q8IZ16 206 aa23.58■■□□□ 1.37
HPS4-213ENST00000483631 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.58■■□□□ 1.37
HPS4-213ENST00000483631 BMP8BP34820 402 aa23.57■■□□□ 1.36
HPS4-213ENST00000483631 TFAP4Q01664 338 aa23.57■■□□□ 1.36
HPS4-213ENST00000483631 MSL3Q8N5Y2 521 aaKnown RBP23.57■■□□□ 1.36
HPS4-213ENST00000483631 ARRDC4Q8NCT1 418 aa23.57■■□□□ 1.36
HPS4-213ENST00000483631 NUP88Q99567 741 aaPredicted RBP23.57■■□□□ 1.36
HPS4-213ENST00000483631 ZMYM6O95789 1325 aa23.57■■□□□ 1.36
HPS4-213ENST00000483631 SMCHD1A6NHR9 2005 aa23.56■■□□□ 1.36
HPS4-213ENST00000483631 ZBED4O75132 1171 aa23.56■■□□□ 1.36
HPS4-213ENST00000483631 OAZ1P54368 228 aa23.56■■□□□ 1.36
HPS4-213ENST00000483631 ZNF792Q3KQV3 632 aa23.56■■□□□ 1.36
HPS4-213ENST00000483631 GDF15Q99988 308 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms