RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 ERCC3P19447 782 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 CYP2C19P33261 490 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 CDK8P49336 464 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 C1orf53Q5VUE5 145 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 ZSCAN25Q6NSZ9 544 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 GIMAP6Q6P9H5 292 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 DPP9Q86TI2 863 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 SLC44A5Q8NCS7 719 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 TANGO6Q9C0B7 1094 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 UBE2OQ9C0C9 1292 aaKnown RBP13.88□□□□□ -0.19
GARNL3-217ENST00000481875 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 PLXNA1Q9UIW2 1896 aa13.88□□□□□ -0.19
GARNL3-217ENST00000481875 USP17L12C9JPN9 530 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 USP17L21D6R901 530 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 PRKAB2O43741 272 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 COBLO75128 1261 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 MBD4O95243 580 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 CYP2D6P10635 497 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 AKR1B1P15121 316 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 ICA1Q05084 483 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 HDAC1Q13547 482 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-217ENST00000481875 SNX17Q15036 470 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 WDR78Q5VTH9 848 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 FAM109BQ6ICB4 259 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-217ENST00000481875 AMOTL1Q8IY63 956 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 CCDC136Q96JN2 1154 aa13.87□□□□□ -0.19
GARNL3-217ENST00000481875 SENP6Q9GZR1 1112 aaPredicted RBP13.87□□□□□ -0.19
GARNL3-217ENST00000481875 DIS3Q9Y2L1 958 aaKnown RBP13.87□□□□□ -0.19
GARNL3-217ENST00000481875 LTBP2Q14767 1821 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 APBB1O00213 710 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 FLOT1O75955 427 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 COPB2P35606 906 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 SBK1Q52WX2 424 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 CTR9Q6PD62 1173 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 RIOX2Q8IUF8 465 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 DDRGK1Q96HY6 314 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 LRRCC1Q9C099 1032 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 PPP4R2Q9NY27 417 aa13.86□□□□□ -0.19
GARNL3-217ENST00000481875 ROBO3Q96MS0 1386 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 POTEB2H3BUK9 544 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 IGHDP01880 384 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 FCER1AP12319 257 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 TMEM132BQ14DG7 1078 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 DEFB123Q8N688 67 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 ATG4CQ96DT6 458 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 MAML3Q96JK9 1138 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 PUS7LQ9H0K6 701 aaKnown RBP13.85□□□□□ -0.19
GARNL3-217ENST00000481875 MTMR10Q9NXD2 777 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 ARPP21Q9UBL0 812 aaPredicted RBP13.85□□□□□ -0.19
GARNL3-217ENST00000481875 SYNPO2Q9UMS6 1093 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 STXBP5LQ9Y2K9 1186 aa13.85□□□□□ -0.19
GARNL3-217ENST00000481875 VWA5AO00534 786 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 EEF2P13639 858 aaKnown RBP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 CNGA1P29973 690 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 SLFNL1Q499Z3 407 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 SLC39A5Q6ZMH5 540 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 MSL3Q8N5Y2 521 aaKnown RBP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 STRBPQ96SI9 672 aaKnown RBP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 BCL11AQ9H165 835 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
GARNL3-217ENST00000481875 PPP1R9AQ9ULJ8 1098 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 SLC4A4Q9Y6R1 1079 aa13.84□□□□□ -0.19
GARNL3-217ENST00000481875 CDH23Q9H251 3354 aa13.83□□□□□ -0.19
GARNL3-217ENST00000481875 SMIM22K7EJ46 135 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 ATP2A1O14983 1001 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 ZNF792Q3KQV3 632 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 B4GALNT3Q6L9W6 998 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 NCAPG2Q86XI2 1143 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 SPICE1Q8N0Z3 855 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 SLC17A8Q8NDX2 589 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 REPS2Q8NFH8 660 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 ECHDC1Q9NTX5 307 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 NYAP2Q9P242 653 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 MYH4Q9Y623 1939 aa13.83□□□□□ -0.2
GARNL3-217ENST00000481875 CYP2D7A0A087X1C5 515 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 GSG1L2A8MUP6 293 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 KBTBD13C9JR72 458 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 ZFYP08048 801 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-217ENST00000481875 STAT3P40763 770 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 RTP1P59025 263 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 PLS1Q14651 629 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 ANKRD45Q5TZF3 282 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 CLEC10AQ8IUN9 316 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 MKL1Q969V6 931 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 LBHD1Q9BQE6 289 aaPredicted RBP13.82□□□□□ -0.2
GARNL3-217ENST00000481875 TINF2Q9BSI4 451 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 GTF3C3Q9Y5Q9 886 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 EYSQ5T1H1 3165 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 PRUNE2Q8WUY3 3088 aa13.82□□□□□ -0.2
GARNL3-217ENST00000481875 CHGBP05060 677 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 RASA1P20936 1047 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 MDM2Q00987 491 aaPredicted RBP13.81□□□□□ -0.2
GARNL3-217ENST00000481875 LRRC41Q15345 812 aa13.81□□□□□ -0.2
GARNL3-217ENST00000481875 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms