RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 MAML3Q96JK9 1138 aa14.13□□□□□ -0.15
CPSF7-211ENST00000477890 LRRCC1Q9C099 1032 aa14.13□□□□□ -0.15
CPSF7-211ENST00000477890 PUS7LQ9H0K6 701 aaKnown RBP14.13□□□□□ -0.15
CPSF7-211ENST00000477890 PRKAG2Q9UGJ0 569 aa14.13□□□□□ -0.15
CPSF7-211ENST00000477890 KBTBD13C9JR72 458 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 SMARCA5O60264 1052 aaPredicted RBP14.12□□□□□ -0.15
CPSF7-211ENST00000477890 TMEM132BQ14DG7 1078 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 CTR9Q6PD62 1173 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 KANSL2Q9H9L4 492 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 FBXO28Q9NVF7 368 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 RCAN3Q9UKA8 241 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 ATP11BQ9Y2G3 1177 aa14.12□□□□□ -0.15
CPSF7-211ENST00000477890 LTBP2Q14767 1821 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 SMCHD1A6NHR9 2005 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 DLL1O00548 723 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 SLC25A27O95847 323 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 SLC39A5Q6ZMH5 540 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 MMP19Q99542 508 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 GOPCQ9HD26 462 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 MTMR10Q9NXD2 777 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 PLXNA1Q9UIW2 1896 aa14.11□□□□□ -0.15
CPSF7-211ENST00000477890 FAM47AQ5JRC9 791 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 FAM83BQ5T0W9 1011 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 RIOX2Q8IUF8 465 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 STK11IPQ8N1F8 1099 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 PRDM5Q9NQX1 630 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-211ENST00000477890 ARPP21Q9UBL0 812 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-211ENST00000477890 ADAMTS5Q9UNA0 930 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 STXBP5LQ9Y2K9 1186 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 COL6A3P12111 3177 aa14.1□□□□□ -0.15
CPSF7-211ENST00000477890 GREB1LQ9C091 1923 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-211ENST00000477890 VWA5AO00534 786 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 PGK2P07205 417 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 STAT3P40763 770 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 ADCYAP1R1P41586 468 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 KCTD2Q14681 263 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 LRRC41Q15345 812 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 C20orf194Q5TEA3 1177 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 FERMT2Q96AC1 680 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 ECHDC1Q9NTX5 307 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 PPP1R9AQ9ULJ8 1098 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 DNAH12Q6ZR08 3092 aa14.09□□□□□ -0.15
CPSF7-211ENST00000477890 TRIM60Q495X7 471 aa14.08□□□□□ -0.16
CPSF7-211ENST00000477890 STRBPQ96SI9 672 aaKnown RBP14.08□□□□□ -0.16
CPSF7-211ENST00000477890 TINF2Q9BSI4 451 aa14.08□□□□□ -0.16
CPSF7-211ENST00000477890 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.08□□□□□ -0.16
CPSF7-211ENST00000477890 MKNK2Q9HBH9 465 aa14.08□□□□□ -0.16
CPSF7-211ENST00000477890 NRBP1Q9UHY1 535 aa14.08□□□□□ -0.16
CPSF7-211ENST00000477890 ZNF214Q9UL59 606 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-211ENST00000477890 GSG1L2A8MUP6 293 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 MINDY4BA8MYZ0 360 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 RARBP10826 455 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 RASA1P20936 1047 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 COPB2P35606 906 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 SNX17Q15036 470 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 ZNF792Q3KQV3 632 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 SBK1Q52WX2 424 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 KBTBD3Q8NAB2 608 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 REPS2Q8NFH8 660 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 NUP88Q99567 741 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-211ENST00000477890 SLF1Q9BQI6 1058 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 XPNPEP3Q9NQH7 507 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
CPSF7-211ENST00000477890 MYH4Q9Y623 1939 aa14.07□□□□□ -0.16
CPSF7-211ENST00000477890 POTEB2H3BUK9 544 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 PGK1P00558 417 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 TAL1P17542 331 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-211ENST00000477890 TSHZ3Q63HK5 1081 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 APPBP2Q92624 585 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 BADQ92934 168 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 OSBP2Q969R2 916 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 FAM161BQ96MY7 647 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 PDLIM7Q9NR12 457 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 NYAP2Q9P242 653 aa14.06□□□□□ -0.16
CPSF7-211ENST00000477890 F5H6K3 240 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 RNF113AO15541 343 aaKnown RBP14.05□□□□□ -0.16
CPSF7-211ENST00000477890 ZNF865P0CJ78 1059 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-211ENST00000477890 AKR1A1P14550 325 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 KLRC3Q07444 240 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 SHHQ15465 462 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 C9orf50Q5SZB4 431 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 C1orf53Q5VUE5 145 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 FAM109BQ6ICB4 259 aaPredicted RBP14.05□□□□□ -0.16
CPSF7-211ENST00000477890 SNRNP48Q6IEG0 339 aaKnown RBP14.05□□□□□ -0.16
CPSF7-211ENST00000477890 GIMAP6Q6P9H5 292 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 SH3RF1Q7Z6J0 888 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 RNF180Q86T96 592 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 TEX13BQ9BXU2 312 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 CLIP2Q9UDT6 1046 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 PHF24Q9UPV7 400 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 CNPY2Q9Y2B0 182 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 ROBO3Q96MS0 1386 aa14.05□□□□□ -0.16
CPSF7-211ENST00000477890 TRIM43BA6NCK2 446 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 GPAA1O43292 621 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 NDUFB10O96000 172 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 APPP05067 770 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 TDO2P48775 406 aa14.04□□□□□ -0.16
CPSF7-211ENST00000477890 TLE2Q04725 743 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms