RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 SMCHD1A6NHR9 2005 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 A0A1W2PRG0 241 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 TOP1P11387 765 aaKnown RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 ECE1P42892 770 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 NOVP48745 357 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 DGKZQ13574 1117 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 GNL2Q13823 731 aaKnown RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 TRIM29Q14134 588 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 KIAA1755Q5JYT7 1200 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 SPECC1Q5M775 1068 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 AGBL3Q8NEM8 1001 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 CLIC6Q96NY7 704 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 GLIS2Q9BZE0 524 aaPredicted RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 CABP5Q9NP86 173 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 RBM28Q9NW13 759 aaKnown RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 CNOT7Q9UIV1 285 aaKnown RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 RCOR1Q9UKL0 485 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 HDAC9Q9UKV0 1011 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 ISY1Q9ULR0 285 aaKnown RBP13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 PCDHA7Q9UN72 937 aa13.65□□□□□ -0.22
TNRC6A-206ENST00000477487 FZD9O00144 591 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 CALM1P0DP23 149 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 CALM2P0DP24 149 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 CALM3P0DP25 149 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 U2AF2P26368 475 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■■■□□ 16.5
TNRC6A-206ENST00000477487 RCAN1P53805 252 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 AKAP17AQ02040 695 aaKnown RBP13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 WWC2Q6AWC2 1192 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 SPICE1Q8N0Z3 855 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 LINC00301Q8NCQ3 95 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 TRPM4Q8TD43 1214 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 IPO4Q8TEX9 1081 aaKnown RBP13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 PIGSQ96S52 555 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 PHF20Q9BVI0 1012 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 ZNF287Q9HBT7 754 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 DACT1Q9NYF0 836 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 PCDHB6Q9Y5E3 794 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 SCG2P13521 617 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 ME1P48163 572 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 TATDN1Q6P1N9 297 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 TEX2Q8IWB9 1127 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 ACER1Q8TDN7 264 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 SCAND2PQ9GZW5 306 aaPredicted RBP13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 PGAP2Q9UHJ9 254 aa13.64□□□□□ -0.23
TNRC6A-206ENST00000477487 EPS15P42566 896 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 HEATR3Q7Z4Q2 680 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 NOSTRINQ8IVI9 506 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 BICD2Q8TD16 824 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 EHD4Q9H223 541 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 PLIN4Q96Q06 1357 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 SBF1O95248 1867 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 A0A1B0GVL5 298 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 ENTPD3O75355 529 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 TTLL1O95922 423 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 PARP1P09874 1014 aaKnown RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 RASA3Q14644 834 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 ZYXQ15942 572 aaKnown RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 PFKFB3Q16875 520 aaPredicted RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 ANO1Q5XXA6 986 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 SWAP70Q9UH65 585 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 POLR2AP24928 1970 aaKnown RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 ATRNL1Q5VV63 1379 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 DDNO94850 711 aaPredicted RBP13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 MBD3O95983 291 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 CKAP2LQ8IYA6 745 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 RTEL1Q9NZ71 1219 aa13.63□□□□□ -0.23
TNRC6A-206ENST00000477487 PPP1R11O60927 126 aaPredicted RBP13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 STK38Q15208 465 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 PTPAQ15257 358 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 RNF214Q8ND24 703 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 FAM151AQ8WW52 585 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 COA7Q96BR5 231 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 TRIM34Q9BYJ4 488 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 ELP1O95163 1332 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 KIF5BP33176 963 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 HIRAP54198 1017 aaPredicted RBP13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 CCAR1Q8IX12 1150 aaKnown RBP13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 TNFRSF25Q93038 417 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 VPS33BQ9H267 617 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 GRPEL1Q9HAV7 217 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 TMOD2Q9NZR1 351 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 CFAP45Q9UL16 551 aa13.62□□□□□ -0.23
TNRC6A-206ENST00000477487 MRE11P49959 708 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 ICA1Q05084 483 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 CCDC96Q2M329 555 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 BRAPQ7Z569 592 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 TEPSINQ96N21 525 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 ZNF396Q96N95 335 aaPredicted RBP13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 HACL1Q9UJ83 578 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 USP17L10C9JJH3 530 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 STXBP3O00186 592 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 SPTLC2O15270 562 aa13.61□□□□□ -0.23
TNRC6A-206ENST00000477487 CHRM1P11229 460 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms