RNA–Protein interactions for RNA: ENST00000468612.5

NEDD9-207, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 809 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-207ENST00000468612 SYNRGQ9UMZ2 1314 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 FGBP02675 491 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-207ENST00000468612 RABGGTBP53611 331 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 NHLH1Q02575 133 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 KCNA10Q16322 511 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 CCDC184Q52MB2 194 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 NAA16Q6N069 864 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-207ENST00000468612 ADGRA1Q86SQ6 560 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 NCAPG2Q86XI2 1143 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 MB21D1Q8N884 522 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 PPP1R12CQ9BZL4 782 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 LRP2BPQ9P2M1 347 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 AKAP2Q9Y2D5 859 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 SALL2Q9Y467 1007 aaPredicted RBP13.66□□□□□ -0.22
NEDD9-207ENST00000468612 PCDHA11Q9Y5I1 949 aa13.66□□□□□ -0.22
NEDD9-207ENST00000468612 ZNFX1Q9P2E3 1918 aaKnown RBP13.65□□□□□ -0.22
NEDD9-207ENST00000468612 APBB1O00213 710 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 FCER1AP12319 257 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 MYOGP15173 224 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 CYP2C18P33260 490 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 GUCY1A2P33402 732 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 MCAMP43121 646 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 FAM126BQ8IXS8 530 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 DIS3Q9Y2L1 958 aaKnown RBP13.65□□□□□ -0.22
NEDD9-207ENST00000468612 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.65□□□□□ -0.22
NEDD9-207ENST00000468612 USP34Q70CQ2 3546 aa13.65□□□□□ -0.22
NEDD9-207ENST00000468612 MYADML2A6NDP7 307 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 ARVCFO00192 962 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 RFXAPO00287 272 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 GTPBP6O43824 516 aaPredicted RBP13.64□□□□□ -0.23
NEDD9-207ENST00000468612 CST5P28325 142 aaPredicted RBP13.64□□□□□ -0.23
NEDD9-207ENST00000468612 TFCP2Q12800 502 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 ABCB5Q2M3G0 1257 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 ZNF792Q3KQV3 632 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 CERKLQ49MI3 558 aaPredicted RBP13.64□□□□□ -0.23
NEDD9-207ENST00000468612 OTOP2Q7RTS6 562 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 HLA-CQ95604 372 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 GLT1D1Q96MS3 346 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 EHD4Q9H223 541 aa13.64□□□□□ -0.23
NEDD9-207ENST00000468612 A0A0U1RQG5 324 aaPredicted RBP13.63□□□□□ -0.23
NEDD9-207ENST00000468612 A0A1W2PRG0 241 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 EPOPA6NHQ4 379 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 CD4P01730 458 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 PGK2P07205 417 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 UBTFL1P0CB47 393 aaPredicted RBP13.63□□□□□ -0.23
NEDD9-207ENST00000468612 DSG3P32926 999 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 PLS1Q14651 629 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 KRT40Q6A162 431 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 CDCA7LQ96GN5 454 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 NEUROD6Q96NK8 337 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 TANGO6Q9C0B7 1094 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 SERPINB13Q9UIV8 391 aa13.63□□□□□ -0.23
NEDD9-207ENST00000468612 CACNA1AO00555 2505 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 BRWD1Q9NSI6 2320 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 CFAP54Q96N23 3096 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 TLR3O15455 904 aaKnown RBP13.62□□□□□ -0.23
NEDD9-207ENST00000468612 SLC25A27O95847 323 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 ASGR1P07306 291 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 IRX5P78411 483 aaPredicted RBP13.62□□□□□ -0.23
NEDD9-207ENST00000468612 KIAA1755Q5JYT7 1200 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 ATG4CQ96DT6 458 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 FBXL18Q96ME1 805 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 MMP19Q99542 508 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 KCNH6Q9H252 994 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 CABP5Q9NP86 173 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 CNPY2Q9Y2B0 182 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
NEDD9-207ENST00000468612 MYH1P12882 1939 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 DUSP11O75319 330 aaKnown RBP13.61□□□□□ -0.23
NEDD9-207ENST00000468612 SHMT1P34896 483 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 DYNLL1P63167 89 aaKnown RBP13.61□□□□□ -0.23
NEDD9-207ENST00000468612 TMEM132BQ14DG7 1078 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 SEPT2Q15019 361 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 GORABQ5T7V8 394 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 VWCEQ96DN2 955 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 FAM184BQ9ULE4 1060 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 UMODL1Q5DID0 1318 aa13.61□□□□□ -0.23
NEDD9-207ENST00000468612 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
NEDD9-207ENST00000468612 UQCRFS1P1P0C7P4 283 aa13.6□□□□□ -0.23
NEDD9-207ENST00000468612 ATP2A2P16615 1042 aaKnown RBP13.6□□□□□ -0.23
NEDD9-207ENST00000468612 MSL3Q8N5Y2 521 aaKnown RBP13.6□□□□□ -0.23
NEDD9-207ENST00000468612 PCSK9Q8NBP7 692 aaKnown RBP13.6□□□□□ -0.23
NEDD9-207ENST00000468612 VTI1AQ96AJ9 217 aa13.6□□□□□ -0.23
NEDD9-207ENST00000468612 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
NEDD9-207ENST00000468612 HIPK3Q9H422 1215 aa13.6□□□□□ -0.23
NEDD9-207ENST00000468612 FLOT1O75955 427 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 CA3P07451 260 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 C6orf222P0C671 652 aaPredicted RBP13.59□□□□□ -0.23
NEDD9-207ENST00000468612 RIOX2Q8IUF8 465 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 SLC43A3Q8NBI5 491 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 CERS4Q9HA82 394 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 ADAMTS5Q9UNA0 930 aa13.59□□□□□ -0.23
NEDD9-207ENST00000468612 ADCY6O43306 1168 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 IGSF3O75054 1194 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 CCL23P55773 120 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 GJA9P57773 515 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 KCTD2Q14681 263 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.24
NEDD9-207ENST00000468612 MAMDC4Q6UXC1 1216 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms