RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 MDM2Q00987 491 aaPredicted RBP20.74■□□□□ 0.91
TRIM56-203ENST00000467847 CTR9Q6PD62 1173 aa20.74■□□□□ 0.91
TRIM56-203ENST00000467847 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.74■□□□□ 0.91
TRIM56-203ENST00000467847 ABRAQ8N0Z2 381 aa20.74■□□□□ 0.91
TRIM56-203ENST00000467847 PUS7LQ9H0K6 701 aaKnown RBP20.74■□□□□ 0.91
TRIM56-203ENST00000467847 KANSL2Q9H9L4 492 aa20.74■□□□□ 0.91
TRIM56-203ENST00000467847 GJC2Q5T442 439 aaPredicted RBP20.73■□□□□ 0.91
TRIM56-203ENST00000467847 ARRDC4Q8NCT1 418 aa20.73■□□□□ 0.91
TRIM56-203ENST00000467847 GOPCQ9HD26 462 aa20.73■□□□□ 0.91
TRIM56-203ENST00000467847 SEPT4O43236 478 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 RAD21O60216 631 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 FCER1AP12319 257 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 TMEM132BQ14DG7 1078 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 ANO1Q5XXA6 986 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 ECHDC1Q9NTX5 307 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 ARPP21Q9UBL0 812 aaPredicted RBP20.72■□□□□ 0.91
TRIM56-203ENST00000467847 UNC80Q8N2C7 3258 aa20.72■□□□□ 0.91
TRIM56-203ENST00000467847 KBTBD13C9JR72 458 aa20.71■□□□□ 0.91
TRIM56-203ENST00000467847 SLC25A27O95847 323 aa20.71■□□□□ 0.91
TRIM56-203ENST00000467847 MYCNP04198 464 aaPredicted RBP20.71■□□□□ 0.91
TRIM56-203ENST00000467847 MAML3Q96JK9 1138 aa20.71■□□□□ 0.91
TRIM56-203ENST00000467847 LBHD1Q9BQE6 289 aaPredicted RBP20.71■□□□□ 0.91
TRIM56-203ENST00000467847 FBXO28Q9NVF7 368 aa20.71■□□□□ 0.91
TRIM56-203ENST00000467847 PLXNA1Q9UIW2 1896 aa20.71■□□□□ 0.91
TRIM56-203ENST00000467847 GREB1LQ9C091 1923 aaPredicted RBP20.7■□□□□ 0.91
TRIM56-203ENST00000467847 RTP1P59025 263 aa20.7■□□□□ 0.9
TRIM56-203ENST00000467847 PRAMEF19Q5SWL8 479 aa20.7■□□□□ 0.9
TRIM56-203ENST00000467847 STRBPQ96SI9 672 aaKnown RBP20.7■□□□□ 0.9
TRIM56-203ENST00000467847 PRKAG2Q9UGJ0 569 aa20.7■□□□□ 0.9
TRIM56-203ENST00000467847 ADAMTS5Q9UNA0 930 aa20.7■□□□□ 0.9
TRIM56-203ENST00000467847 FAM83BQ5T0W9 1011 aa20.69■□□□□ 0.9
TRIM56-203ENST00000467847 GPATCH3Q96I76 525 aa20.69■□□□□ 0.9
TRIM56-203ENST00000467847 MMP19Q99542 508 aa20.69■□□□□ 0.9
TRIM56-203ENST00000467847 PPP1R9AQ9ULJ8 1098 aa20.69■□□□□ 0.9
TRIM56-203ENST00000467847 ATP11BQ9Y2G3 1177 aa20.69■□□□□ 0.9
TRIM56-203ENST00000467847 LAMA2P24043 3122 aaKnown RBP20.69■□□□□ 0.9
TRIM56-203ENST00000467847 SMCHD1A6NHR9 2005 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 VWA5AO00534 786 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 RIOX2Q8IUF8 465 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 STK11IPQ8N1F8 1099 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRIM56-203ENST00000467847 LTBP2Q14767 1821 aa20.68■□□□□ 0.9
TRIM56-203ENST00000467847 GSG1L2A8MUP6 293 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 PGK2P07205 417 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 STAT3P40763 770 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 KCTD2Q14681 263 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 SBK1Q52WX2 424 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 SLC39A5Q6ZMH5 540 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 MKNK2Q9HBH9 465 aa20.67■□□□□ 0.9
TRIM56-203ENST00000467847 MINDY4BA8MYZ0 360 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 RASA1P20936 1047 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 LRRC41Q15345 812 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 TSHZ3Q63HK5 1081 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 GIMAP6Q6P9H5 292 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 APPBP2Q92624 585 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 OSBP2Q969R2 916 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 DCTPP1Q9H773 170 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 NRBP1Q9UHY1 535 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 ZNF214Q9UL59 606 aaPredicted RBP20.66■□□□□ 0.9
TRIM56-203ENST00000467847 ROBO3Q96MS0 1386 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 MYH4Q9Y623 1939 aa20.66■□□□□ 0.9
TRIM56-203ENST00000467847 RNF113AO15541 343 aaKnown RBP20.65■□□□□ 0.9
TRIM56-203ENST00000467847 COPB2P35606 906 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 ADCYAP1R1P41586 468 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 FAM47AQ5JRC9 791 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 REPS2Q8NFH8 660 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 FAM161BQ96MY7 647 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 NUP88Q99567 741 aaPredicted RBP20.65■□□□□ 0.9
TRIM56-203ENST00000467847 SLF1Q9BQI6 1058 aa20.65■□□□□ 0.9
TRIM56-203ENST00000467847 RARBP10826 455 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 ZNF792Q3KQV3 632 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 TRIM60Q495X7 471 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 FERMT2Q96AC1 680 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 TINF2Q9BSI4 451 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 XPNPEP3Q9NQH7 507 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 PRDM5Q9NQX1 630 aaPredicted RBP20.64■□□□□ 0.89
TRIM56-203ENST00000467847 NYAP2Q9P242 653 aa20.64■□□□□ 0.89
TRIM56-203ENST00000467847 DIS3Q9Y2L1 958 aaKnown RBP20.64■□□□□ 0.89
TRIM56-203ENST00000467847 GPAA1O43292 621 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 APPP05067 770 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 ZFYP08048 801 aaPredicted RBP20.63■□□□□ 0.89
TRIM56-203ENST00000467847 GNAT2P19087 354 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 TDO2P48775 406 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 SNX17Q15036 470 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 FAM109BQ6ICB4 259 aaPredicted RBP20.63■□□□□ 0.89
TRIM56-203ENST00000467847 TEX13BQ9BXU2 312 aa20.63■□□□□ 0.89
TRIM56-203ENST00000467847 EPB41L4AQ9HCS5 686 aaPredicted RBP20.63■□□□□ 0.89
TRIM56-203ENST00000467847 F5H6K3 240 aa20.62■□□□□ 0.89
TRIM56-203ENST00000467847 NDUFB10O96000 172 aa20.62■□□□□ 0.89
TRIM56-203ENST00000467847 KLRC3Q07444 240 aa20.62■□□□□ 0.89
TRIM56-203ENST00000467847 SNRNP48Q6IEG0 339 aaKnown RBP20.62■□□□□ 0.89
TRIM56-203ENST00000467847 ZNF287Q9HBT7 754 aa20.62■□□□□ 0.89
TRIM56-203ENST00000467847 CLIP2Q9UDT6 1046 aa20.62■□□□□ 0.89
TRIM56-203ENST00000467847 M0R2C6 588 aa20.61■□□□□ 0.89
TRIM56-203ENST00000467847 TAL1P17542 331 aaPredicted RBP20.61■□□□□ 0.89
TRIM56-203ENST00000467847 ZNF697Q5TEC3 545 aa20.61■□□□□ 0.89
TRIM56-203ENST00000467847 RNF180Q86T96 592 aa20.61■□□□□ 0.89
TRIM56-203ENST00000467847 ZNF444Q8N0Y2 327 aaPredicted RBP20.61■□□□□ 0.89
TRIM56-203ENST00000467847 GUCD1Q96NT3 240 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms