RNA–Protein interactions for RNA: ENST00000467661.5

NELFA-213, Transcript of negative elongation factor complex member A, humanhuman

TSL 1 (best)

Gene NELFA, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-213ENST00000467661 COA1Q9GZY4 146 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 ATP6V0A2Q9Y487 856 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 ANKRD31Q8N7Z5 1873 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 PTGDRQ13258 359 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 NLGN1Q8N2Q7 840 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 NEDD1Q8NHV4 660 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 DHX58Q96C10 678 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 TMEM47Q9BQJ4 181 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 STX8Q9UNK0 236 aa20.07■□□□□ 0.8
NELFA-213ENST00000467661 SNED1Q8TER0 1413 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 PALM3A6NDB9 673 aaPredicted RBP20.06■□□□□ 0.8
NELFA-213ENST00000467661 PRR29P0C7W0 189 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 UBASH3AP57075 661 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 RHBDL3P58872 404 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 CCZ1BP86790 482 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 CCZ1P86791 482 aaPredicted RBP20.06■□□□□ 0.8
NELFA-213ENST00000467661 TPD52L1Q16890 204 aaPredicted RBP20.06■□□□□ 0.8
NELFA-213ENST00000467661 ARL6IP4Q66PJ3 421 aaKnown RBP20.06■□□□□ 0.8
NELFA-213ENST00000467661 USP49Q70CQ1 688 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 STAG2Q8N3U4 1231 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 DAGLBQ8NCG7 672 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 SLC44A5Q8NCS7 719 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 SPATA20Q8TB22 786 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 HSD3B7Q9H2F3 369 aa20.06■□□□□ 0.8
NELFA-213ENST00000467661 GTF2F1P35269 517 aaKnown RBP eCLIP20.05■□□□□ 0.8
NELFA-213ENST00000467661 EPSTI1Q96J88 318 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 PSDA5PKW4 1024 aaPredicted RBP20.05■□□□□ 0.8
NELFA-213ENST00000467661 VWA3AA6NCI4 1184 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 NPR1P16066 1061 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 BMP6P22004 513 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 SFPQP23246 707 aaKnown RBP eCLIP20.05■□□□□ 0.8
NELFA-213ENST00000467661 ARID5BQ14865 1188 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 ENOX1Q8TC92 643 aaKnown RBP20.05■□□□□ 0.8
NELFA-213ENST00000467661 CCDC12Q8WUD4 166 aaPredicted RBP20.05■□□□□ 0.8
NELFA-213ENST00000467661 SPZ1Q9BXG8 430 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 KCND1Q9NSA2 647 aa20.05■□□□□ 0.8
NELFA-213ENST00000467661 CCDC194A0A1B0GVG4 234 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 WNT7AO00755 349 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 ATP1A3P13637 1013 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 ERCC5P28715 1186 aaPredicted RBP20.04■□□□□ 0.8
NELFA-213ENST00000467661 ALDH1B1P30837 517 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 GTF2IP78347 998 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 CFAP100Q494V2 611 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 NOM1Q5C9Z4 860 aaKnown RBP20.04■□□□□ 0.8
NELFA-213ENST00000467661 SH3RF1Q7Z6J0 888 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
NELFA-213ENST00000467661 BARHL2Q9NY43 387 aa20.04■□□□□ 0.8
NELFA-213ENST00000467661 TOP1P11387 765 aaKnown RBP20.03■□□□□ 0.8
NELFA-213ENST00000467661 SMARCA1P28370 1054 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 MCM7P33993 719 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 TXLNAP40222 546 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 KCNJ6P48051 423 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 IQUBQ8NA54 791 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 GPKOWQ92917 476 aaPredicted RBP eCLIP20.03■□□□□ 0.8
NELFA-213ENST00000467661 PAGE5Q96GU1 130 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 GSDMAQ96QA5 445 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 ZC3H12CQ9C0D7 883 aaKnown RBP20.03■□□□□ 0.8
NELFA-213ENST00000467661 FANCLQ9NW38 375 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
NELFA-213ENST00000467661 PARP1P09874 1014 aaKnown RBP20.02■□□□□ 0.8
NELFA-213ENST00000467661 TNNT1P13805 278 aa20.02■□□□□ 0.8
NELFA-213ENST00000467661 LONP1P36776 959 aaKnown RBP20.02■□□□□ 0.8
NELFA-213ENST00000467661 C16orf45Q96MC5 204 aaPredicted RBP20.02■□□□□ 0.8
NELFA-213ENST00000467661 PLIN4Q96Q06 1357 aa20.02■□□□□ 0.8
NELFA-213ENST00000467661 A0A087X0B3 334 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 KLRF2D3W0D1 207 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 RRP9O43818 475 aaKnown RBP20.02■□□□□ 0.79
NELFA-213ENST00000467661 SRGNP10124 158 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 VEGFAP15692 232 aaPredicted RBP20.02■□□□□ 0.79
NELFA-213ENST00000467661 PDE6BP35913 854 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 WWC2Q6AWC2 1192 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 HEATR3Q7Z4Q2 680 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 PAXBP1Q9Y5B6 917 aa20.02■□□□□ 0.79
NELFA-213ENST00000467661 M0R2N6 131 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 STXBP3O00186 592 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 RIMBP2O15034 1052 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 AFMP43652 599 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 CCDC112Q8NEF3 446 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 SLC16A10Q8TF71 515 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 NFE2L3Q9Y4A8 694 aa20.01■□□□□ 0.79
NELFA-213ENST00000467661 LAD1O00515 517 aa20■□□□□ 0.79
NELFA-213ENST00000467661 CYTH3O43739 400 aa20■□□□□ 0.79
NELFA-213ENST00000467661 CDK11BP21127 795 aaKnown RBP20■□□□□ 0.79
NELFA-213ENST00000467661 NOVP48745 357 aa20■□□□□ 0.79
NELFA-213ENST00000467661 DPYDQ12882 1025 aa20■□□□□ 0.79
NELFA-213ENST00000467661 ARMCX5Q6P1M9 558 aa20■□□□□ 0.79
NELFA-213ENST00000467661 VSTM4Q8IW00 320 aa20■□□□□ 0.79
NELFA-213ENST00000467661 MTMR7Q9Y216 660 aa20■□□□□ 0.79
NELFA-213ENST00000467661 MYH8P13535 1937 aa20■□□□□ 0.79
NELFA-213ENST00000467661 KIF2AO00139 706 aaPredicted RBP19.99■□□□□ 0.79
NELFA-213ENST00000467661 DPP8Q6V1X1 898 aaPredicted RBP19.99■□□□□ 0.79
NELFA-213ENST00000467661 RRP36Q96EU6 259 aaKnown RBP19.99■□□□□ 0.79
NELFA-213ENST00000467661 SEC63Q9UGP8 760 aaKnown RBP19.99■□□□□ 0.79
NELFA-213ENST00000467661 PCDHA6Q9UN73 950 aa19.99■□□□□ 0.79
NELFA-213ENST00000467661 PCDHA8Q9Y5H6 950 aa19.99■□□□□ 0.79
NELFA-213ENST00000467661 BAZ2BQ9UIF8 2168 aaKnown RBP19.99■□□□□ 0.79
NELFA-213ENST00000467661 hCG_1984214I3L0E3 225 aa19.99■□□□□ 0.79
NELFA-213ENST00000467661 ZNF18P17022 549 aa19.99■□□□□ 0.79
NELFA-213ENST00000467661 FMR1Q06787 632 aaKnown RBP eCLIP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms