RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 ATP11BQ9Y2G3 1177 aa23.8■■□□□ 1.4
VARS-221ENST00000463184 MYH8P13535 1937 aa23.79■■□□□ 1.4
VARS-221ENST00000463184 CYP2D7A0A087X1C5 515 aa23.79■■□□□ 1.4
VARS-221ENST00000463184 EEF2P13639 858 aaKnown RBP23.79■■□□□ 1.4
VARS-221ENST00000463184 TMEM132BQ14DG7 1078 aa23.79■■□□□ 1.4
VARS-221ENST00000463184 PRAMEF19Q5SWL8 479 aa23.79■■□□□ 1.4
VARS-221ENST00000463184 SAMD1Q6SPF0 538 aaPredicted RBP23.79■■□□□ 1.4
VARS-221ENST00000463184 NRBP1Q9UHY1 535 aa23.79■■□□□ 1.4
VARS-221ENST00000463184 SNX17Q15036 470 aa23.78■■□□□ 1.4
VARS-221ENST00000463184 ZSCAN25Q6NSZ9 544 aa23.78■■□□□ 1.4
VARS-221ENST00000463184 GOPCQ9HD26 462 aa23.78■■□□□ 1.4
VARS-221ENST00000463184 SLC4A4Q9Y6R1 1079 aa23.78■■□□□ 1.4
VARS-221ENST00000463184 BAZ2AQ9UIF9 1905 aaKnown RBP23.77■■□□□ 1.4
VARS-221ENST00000463184 SMIM22K7EJ46 135 aa23.77■■□□□ 1.4
VARS-221ENST00000463184 LRRC41Q15345 812 aa23.77■■□□□ 1.4
VARS-221ENST00000463184 CTR9Q6PD62 1173 aa23.77■■□□□ 1.4
VARS-221ENST00000463184 RIOX2Q8IUF8 465 aa23.77■■□□□ 1.4
VARS-221ENST00000463184 MMP19Q99542 508 aa23.77■■□□□ 1.4
VARS-221ENST00000463184 MYCNP04198 464 aaPredicted RBP23.76■■□□□ 1.39
VARS-221ENST00000463184 C1orf53Q5VUE5 145 aa23.76■■□□□ 1.39
VARS-221ENST00000463184 DIS3Q9Y2L1 958 aaKnown RBP23.76■■□□□ 1.39
VARS-221ENST00000463184 VWA5AO00534 786 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 CHGBP05060 677 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 COPB2P35606 906 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 STAT3P40763 770 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 ADCYAP1R1P41586 468 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 PUS7LQ9H0K6 701 aaKnown RBP23.75■■□□□ 1.39
VARS-221ENST00000463184 PPP1R9AQ9ULJ8 1098 aa23.75■■□□□ 1.39
VARS-221ENST00000463184 LAMA2P24043 3122 aaKnown RBP23.75■■□□□ 1.39
VARS-221ENST00000463184 KCTD2Q14681 263 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 TRIM60Q495X7 471 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 FAM47AQ5JRC9 791 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 TINF2Q9BSI4 451 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 LRRCC1Q9C099 1032 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 PRDM5Q9NQX1 630 aaPredicted RBP23.74■■□□□ 1.39
VARS-221ENST00000463184 FBXO28Q9NVF7 368 aa23.74■■□□□ 1.39
VARS-221ENST00000463184 ARPP21Q9UBL0 812 aaPredicted RBP23.74■■□□□ 1.39
VARS-221ENST00000463184 ZNFX1Q9P2E3 1918 aaKnown RBP23.74■■□□□ 1.39
VARS-221ENST00000463184 PARP14Q460N5 1801 aa23.73■■□□□ 1.39
VARS-221ENST00000463184 RARBP10826 455 aa23.73■■□□□ 1.39
VARS-221ENST00000463184 ZNF792Q3KQV3 632 aa23.73■■□□□ 1.39
VARS-221ENST00000463184 FERMT2Q96AC1 680 aa23.73■■□□□ 1.39
VARS-221ENST00000463184 RAD21O60216 631 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 PGK2P07205 417 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 SHHQ15465 462 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 FAM83BQ5T0W9 1011 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 ZNF697Q5TEC3 545 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 BADQ92934 168 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 GUCD1Q96NT3 240 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 XPNPEP3Q9NQH7 507 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 PDLIM7Q9NR12 457 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 ZNF214Q9UL59 606 aaPredicted RBP23.72■■□□□ 1.39
VARS-221ENST00000463184 PHF24Q9UPV7 400 aa23.72■■□□□ 1.39
VARS-221ENST00000463184 LTBP2Q14767 1821 aa23.71■■□□□ 1.39
VARS-221ENST00000463184 SBK1Q52WX2 424 aa23.71■■□□□ 1.39
VARS-221ENST00000463184 RNF180Q86T96 592 aa23.71■■□□□ 1.39
VARS-221ENST00000463184 REPS2Q8NFH8 660 aa23.71■■□□□ 1.39
VARS-221ENST00000463184 STRBPQ96SI9 672 aaKnown RBP23.71■■□□□ 1.39
VARS-221ENST00000463184 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
VARS-221ENST00000463184 GIMAP6Q6P9H5 292 aa23.7■■□□□ 1.38
VARS-221ENST00000463184 RCAN3Q9UKA8 241 aa23.7■■□□□ 1.38
VARS-221ENST00000463184 TACC3Q9Y6A5 838 aa23.7■■□□□ 1.38
VARS-221ENST00000463184 SMCHD1A6NHR9 2005 aa23.7■■□□□ 1.38
VARS-221ENST00000463184 MYH7P12883 1935 aa23.7■■□□□ 1.38
VARS-221ENST00000463184 COL11A1P12107 1806 aaPredicted RBP23.7■■□□□ 1.38
VARS-221ENST00000463184 ROBO3Q96MS0 1386 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 TRIM43BA6NCK2 446 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 AKR1A1P14550 325 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 SH3RF1Q7Z6J0 888 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 MSL3Q8N5Y2 521 aaKnown RBP23.69■■□□□ 1.38
VARS-221ENST00000463184 TRIM43Q96BQ3 446 aaPredicted RBP23.69■■□□□ 1.38
VARS-221ENST00000463184 FAM161BQ96MY7 647 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 SLF1Q9BQI6 1058 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 MKNK2Q9HBH9 465 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 ECHDC1Q9NTX5 307 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 NYAP2Q9P242 653 aa23.69■■□□□ 1.38
VARS-221ENST00000463184 PGK1P00558 417 aa23.68■■□□□ 1.38
VARS-221ENST00000463184 ZNF865P0CJ78 1059 aaPredicted RBP23.68■■□□□ 1.38
VARS-221ENST00000463184 TAL1P17542 331 aaPredicted RBP23.68■■□□□ 1.38
VARS-221ENST00000463184 RASA1P20936 1047 aa23.68■■□□□ 1.38
VARS-221ENST00000463184 TLE2Q04725 743 aa23.68■■□□□ 1.38
VARS-221ENST00000463184 C9orf50Q5SZB4 431 aa23.68■■□□□ 1.38
VARS-221ENST00000463184 CNPY2Q9Y2B0 182 aa23.68■■□□□ 1.38
VARS-221ENST00000463184 GSG1L2A8MUP6 293 aa23.67■■□□□ 1.38
VARS-221ENST00000463184 SMARCA5O60264 1052 aaPredicted RBP23.67■■□□□ 1.38
VARS-221ENST00000463184 TEX13BQ9BXU2 312 aa23.67■■□□□ 1.38
VARS-221ENST00000463184 F5H6K3 240 aa23.66■■□□□ 1.38
VARS-221ENST00000463184 CLTBP09497 229 aa23.66■■□□□ 1.38
VARS-221ENST00000463184 KLRC3Q07444 240 aa23.66■■□□□ 1.38
VARS-221ENST00000463184 KBTBD3Q8NAB2 608 aa23.66■■□□□ 1.38
VARS-221ENST00000463184 PRPF38AQ8NAV1 312 aaKnown RBP23.66■■□□□ 1.38
VARS-221ENST00000463184 TSEN34Q9BSV6 310 aaKnown RBP23.66■■□□□ 1.38
VARS-221ENST00000463184 PLXNA1Q9UIW2 1896 aa23.65■■□□□ 1.38
VARS-221ENST00000463184 A0A1W2PQ45 241 aaPredicted RBP23.65■■□□□ 1.38
VARS-221ENST00000463184 A0A1W2PQY0 241 aa23.65■■□□□ 1.38
VARS-221ENST00000463184 MINDY4BA8MYZ0 360 aa23.65■■□□□ 1.38
VARS-221ENST00000463184 SMAD3P84022 425 aaKnown RBP23.65■■□□□ 1.38
VARS-221ENST00000463184 SNRNP48Q6IEG0 339 aaKnown RBP23.65■■□□□ 1.38
VARS-221ENST00000463184 APPBP2Q92624 585 aa23.65■■□□□ 1.38
VARS-221ENST00000463184 DDX11Q96FC9 970 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms