RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 BDNFP23560 247 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 ECE1P42892 770 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 TM4SF4P48230 202 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 RSPO2Q6UXX9 243 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 ABHD17AQ96GS6 310 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 TMEM87BQ96K49 555 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 STARD13Q9Y3M8 1113 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 ZNF451Q9Y4E5 1061 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 GJA3Q9Y6H8 435 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 CCDC189A1A4V9 331 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 H7C1W4 665 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 ERC2O15083 957 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 PRODHO43272 600 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 FAM50AQ14320 339 aaKnown RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 SLBPQ14493 270 aaKnown RBP eCLIP3.96□□□□□ -1.78
SMC4-203ENST00000462668 CDCA2Q69YH5 1023 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 FAM9AQ8IZU1 332 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 ATL2Q8NHH9 583 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 DNAJB8Q8NHS0 232 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 JPH3Q8WXH2 748 aaPredicted RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 TRMT2BQ96GJ1 504 aaKnown RBP3.96□□□□□ -1.78
SMC4-203ENST00000462668 SLC6A18Q96N87 628 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 ZFYVE21Q9BQ24 234 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 GPAMQ9HCL2 828 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 GTF2IRD1Q9UHL9 959 aa3.96□□□□□ -1.78
SMC4-203ENST00000462668 TTC24A2A3L6 582 aaPredicted RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 ARNTLO00327 626 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ATF3P18847 181 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 GRK4P32298 578 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ZCCHC8Q6NZY4 707 aaKnown RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 IGF2-ASQ6U949 168 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 E2F7Q96AV8 911 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 DHRS1Q96LJ7 313 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 PNMA5Q96PV4 448 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 NKX2-4Q9H2Z4 354 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 PRDM11Q9NQV5 511 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 DCDC2BA2VCK2 349 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 GOLGA6CA6NDK9 693 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 GOLGA6BA6NDN3 693 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ZRANB2O95218 330 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMC4-203ENST00000462668 EPHX1P07099 455 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 GOLGA6DP0CG33 693 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ZNF157P51786 506 aaPredicted RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 PDE4BQ07343 736 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 FOXC1Q12948 553 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 MLECQ14165 292 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 GPR158Q5T848 1215 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 CEP135Q66GS9 1140 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 NSMFQ6X4W1 530 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 TEX2Q8IWB9 1127 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 FUBP3Q96I24 572 aaKnown RBP eCLIP3.95□□□□□ -1.78
SMC4-203ENST00000462668 FBXL18Q96ME1 805 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 WDR18Q9BV38 432 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 SLC12A5Q9H2X9 1139 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 NGRNQ9NPE2 291 aaKnown RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 GOLGA6AQ9NYA3 693 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 B4GALT6Q9UBX8 382 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 PCDHA4Q9UN74 947 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 TRIM33Q9UPN9 1127 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 MEGF11A6BM72 1044 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ID4P47928 161 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ZNF460Q14592 562 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 NKAPQ8N5F7 415 aaKnown RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 SYTL5Q8TDW5 730 aaPredicted RBP3.95□□□□□ -1.78
SMC4-203ENST00000462668 DISC1Q9NRI5 854 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 KLHL11Q9NVR0 708 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 ZNF180Q9UJW8 692 aa3.95□□□□□ -1.78
SMC4-203ENST00000462668 FANCGO15287 622 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 SRGNP10124 158 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 IKBKEQ14164 716 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 DENND5AQ6IQ26 1287 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 C1orf162Q8NEQ5 155 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 PPM1EQ8WY54 764 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ANKRD6Q9Y2G4 727 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 KRBA1A5PL33 1030 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 B4E1Z4 1266 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA12O60330 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 CYP11A1P05108 521 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ZSCAN20P17040 1043 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 HOXC12P31275 282 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 COL9A3Q14050 684 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 GNPTABQ3T906 1256 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 WDR75Q8IWA0 830 aaKnown RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 TTC1Q99614 292 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 CRIM1Q9NZV1 1036 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 WHRNQ9P202 907 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 HIF3AQ9Y2N7 669 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA9Q9Y5G4 932 aaKnown RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA8Q9Y5G5 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA7Q9Y5G6 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA6Q9Y5G7 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA3Q9Y5H0 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 PCDHGA2Q9Y5H1 932 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ASXL2Q76L83 1435 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 AGRPO00253 132 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ALDH5A1P51649 535 aaPredicted RBP3.94□□□□□ -1.78
SMC4-203ENST00000462668 PHC1P78364 1004 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 MINDY4Q4G0A6 757 aa3.94□□□□□ -1.78
SMC4-203ENST00000462668 ZFYVE27Q5T4F4 411 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms