RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 KRT23Q9C075 422 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 TANGO6Q9C0B7 1094 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 CNNM2Q9H8M5 875 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 KANSL2Q9H9L4 492 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 BTBD7Q9P203 1132 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 TMX2Q9Y320 296 aa11.98□□□□□ -0.49
SYN3-206ENST00000461446 LAMA4Q16363 1823 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 PLIN4Q96Q06 1357 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 IGKV6D-41A0A0C4DH26 115 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 B4E1Z4 1266 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 INHAP05111 366 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 CYP2B6P20813 491 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 HSPA4P34932 840 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 TRDNQ13061 729 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 TSGA10IPQ3SY00 556 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 SAMD1Q6SPF0 538 aaPredicted RBP11.97□□□□□ -0.49
SYN3-206ENST00000461446 STOX1Q6ZVD7 989 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 PXYLP1Q8TE99 480 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 GTF3C2Q8WUA4 911 aaPredicted RBP11.97□□□□□ -0.49
SYN3-206ENST00000461446 KCNB2Q92953 911 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 RNF208Q9H0X6 261 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 UNC93B1Q9H1C4 597 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 VCPKMTQ9H867 229 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 MTMR4Q9NYA4 1195 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 ZSWIM5Q9P217 1185 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 RABGAP1Q9Y3P9 1069 aa11.97□□□□□ -0.49
SYN3-206ENST00000461446 MKI67P46013 3256 aaKnown RBP11.97□□□□□ -0.49
SYN3-206ENST00000461446 RAD21O60216 631 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 KDM4AO75164 1064 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 SEC24BO95487 1268 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 UBXN2AP68543 259 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 TRIM32Q13049 653 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 COG2Q14746 738 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 GPR142Q7Z601 462 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 CCAR1Q8IX12 1150 aaKnown RBP11.96□□□□□ -0.49
SYN3-206ENST00000461446 RASEFQ8IZ41 740 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 NCOA7Q8NI08 942 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 LPAR1Q92633 364 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 SHISA4Q96DD7 197 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 CEP95Q96GE4 821 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 IL17RBQ9NRM6 502 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 TCP11L1Q9NUJ3 509 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 NYAP2Q9P242 653 aa11.96□□□□□ -0.49
SYN3-206ENST00000461446 RBBP6Q7Z6E9 1792 aaKnown RBP11.96□□□□□ -0.49
SYN3-206ENST00000461446 PLXNB2O15031 1838 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 TNRC18O15417 2968 aaPredicted RBP11.95□□□□□ -0.5
SYN3-206ENST00000461446 NMT2O60551 498 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 FLOT1O75955 427 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 ZKSCAN1P17029 563 aaPredicted RBP11.95□□□□□ -0.5
SYN3-206ENST00000461446 MAPK4P31152 587 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 NOVP48745 357 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 KRT32Q14532 448 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 WDR78Q5VTH9 848 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 LBX2Q6XYB7 198 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 RALYLQ86SE5 291 aaKnown RBP11.95□□□□□ -0.5
SYN3-206ENST00000461446 MKL1Q969V6 931 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 ATG4CQ96DT6 458 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 NUP88Q99567 741 aaPredicted RBP11.95□□□□□ -0.5
SYN3-206ENST00000461446 NUDT12Q9BQG2 462 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 FBXO28Q9NVF7 368 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 HOXC10Q9NYD6 342 aa11.95□□□□□ -0.5
SYN3-206ENST00000461446 GREB1LQ9C091 1923 aaPredicted RBP11.95□□□□□ -0.5
SYN3-206ENST00000461446 RLFQ13129 1914 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 TTLL1O95922 423 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 GJB1P08034 283 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 DSG3P32926 999 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 CCL14Q16627 93 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 MORN1Q5T089 497 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 FAM83BQ5T0W9 1011 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 IQCA1Q86XH1 822 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 TRIB2Q92519 343 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 USP6NLQ92738 828 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 CWC22Q9HCG8 908 aaKnown RBP11.94□□□□□ -0.5
SYN3-206ENST00000461446 CLIP2Q9UDT6 1046 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 SNX14Q9Y5W7 946 aa11.94□□□□□ -0.5
SYN3-206ENST00000461446 F5H6K3 240 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 WDR46O15213 610 aaKnown RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 HMGCRP04035 888 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 MCCP23508 829 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 GJA8P48165 433 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 CCNA1P78396 465 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 KLRC3Q07444 240 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 PLS1Q14651 629 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 ADCK5Q3MIX3 580 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 CCDC178Q5BJE1 867 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 RCSD1Q6JBY9 416 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 CYB5R4Q7L1T6 521 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 DGKHQ86XP1 1220 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 MB21D2Q8IYB1 491 aaPredicted RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 LRRC47Q8N1G4 583 aaKnown RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 U2AF1L4Q8WU68 220 aaKnown RBP11.93□□□□□ -0.5
SYN3-206ENST00000461446 SOCS4Q8WXH5 440 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 TTC14Q96N46 770 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 DEFB118Q96PH6 123 aa11.93□□□□□ -0.5
SYN3-206ENST00000461446 NEK1Q96PY6 1258 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms