RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 ARPP21Q9UBL0 812 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-220ENST00000458038 MDM2Q00987 491 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-220ENST00000458038 GIMAP6Q6P9H5 292 aa25.84■■□□□ 1.73
CPNE1-220ENST00000458038 CLEC10AQ8IUN9 316 aa25.84■■□□□ 1.73
CPNE1-220ENST00000458038 MAML3Q96JK9 1138 aa25.84■■□□□ 1.73
CPNE1-220ENST00000458038 SMCHD1A6NHR9 2005 aa25.83■■□□□ 1.73
CPNE1-220ENST00000458038 CYP2D7A0A087X1C5 515 aa25.83■■□□□ 1.73
CPNE1-220ENST00000458038 TMEM132BQ14DG7 1078 aa25.83■■□□□ 1.73
CPNE1-220ENST00000458038 RIOX2Q8IUF8 465 aa25.83■■□□□ 1.73
CPNE1-220ENST00000458038 PUS7LQ9H0K6 701 aaKnown RBP25.83■■□□□ 1.73
CPNE1-220ENST00000458038 DIS3Q9Y2L1 958 aaKnown RBP25.83■■□□□ 1.73
CPNE1-220ENST00000458038 COL11A1P12107 1806 aaPredicted RBP25.83■■□□□ 1.73
CPNE1-220ENST00000458038 ATN1P54259 1190 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-220ENST00000458038 RTP1P59025 263 aa25.82■■□□□ 1.72
CPNE1-220ENST00000458038 SBK1Q52WX2 424 aa25.82■■□□□ 1.72
CPNE1-220ENST00000458038 GJC2Q5T442 439 aaPredicted RBP25.82■■□□□ 1.72
CPNE1-220ENST00000458038 ECHDC1Q9NTX5 307 aa25.82■■□□□ 1.72
CPNE1-220ENST00000458038 SLC39A5Q6ZMH5 540 aa25.81■■□□□ 1.72
CPNE1-220ENST00000458038 GPATCH3Q96I76 525 aa25.81■■□□□ 1.72
CPNE1-220ENST00000458038 STRBPQ96SI9 672 aaKnown RBP25.81■■□□□ 1.72
CPNE1-220ENST00000458038 MTMR10Q9NXD2 777 aa25.81■■□□□ 1.72
CPNE1-220ENST00000458038 PPP1R9AQ9ULJ8 1098 aa25.81■■□□□ 1.72
CPNE1-220ENST00000458038 STXBP5LQ9Y2K9 1186 aa25.81■■□□□ 1.72
CPNE1-220ENST00000458038 VWA5AO00534 786 aa25.8■■□□□ 1.72
CPNE1-220ENST00000458038 STAT3P40763 770 aa25.8■■□□□ 1.72
CPNE1-220ENST00000458038 FAM109BQ6ICB4 259 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-220ENST00000458038 SAMD1Q6SPF0 538 aaPredicted RBP25.8■■□□□ 1.72
CPNE1-220ENST00000458038 MMP19Q99542 508 aa25.8■■□□□ 1.72
CPNE1-220ENST00000458038 CUL9Q8IWT3 2517 aa25.79■■□□□ 1.72
CPNE1-220ENST00000458038 KCTD2Q14681 263 aa25.79■■□□□ 1.72
CPNE1-220ENST00000458038 C1orf53Q5VUE5 145 aa25.79■■□□□ 1.72
CPNE1-220ENST00000458038 KBTBD3Q8NAB2 608 aa25.79■■□□□ 1.72
CPNE1-220ENST00000458038 PLXNA1Q9UIW2 1896 aa25.79■■□□□ 1.72
CPNE1-220ENST00000458038 SMIM22K7EJ46 135 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 CHGBP05060 677 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 ZFYP08048 801 aaPredicted RBP25.78■■□□□ 1.72
CPNE1-220ENST00000458038 SNX17Q15036 470 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 LRRC41Q15345 812 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 PRAMEF19Q5SWL8 479 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 MKNK2Q9HBH9 465 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 ZNF287Q9HBT7 754 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 FBXO28Q9NVF7 368 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 NYAP2Q9P242 653 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 ATP11BQ9Y2G3 1177 aa25.78■■□□□ 1.72
CPNE1-220ENST00000458038 GREB1LQ9C091 1923 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-220ENST00000458038 LRRFIP1Q32MZ4 808 aaKnown RBP25.77■■□□□ 1.72
CPNE1-220ENST00000458038 Q7L0L9 218 aa25.77■■□□□ 1.72
CPNE1-220ENST00000458038 TINF2Q9BSI4 451 aa25.77■■□□□ 1.72
CPNE1-220ENST00000458038 ZNF214Q9UL59 606 aaPredicted RBP25.77■■□□□ 1.72
CPNE1-220ENST00000458038 GSG1L2A8MUP6 293 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 RAD21O60216 631 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 SMARCA5O60264 1052 aaPredicted RBP25.76■■□□□ 1.71
CPNE1-220ENST00000458038 RARBP10826 455 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 GNAT2P19087 354 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 ZNF792Q3KQV3 632 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 FAM83BQ5T0W9 1011 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 ANO1Q5XXA6 986 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 MSL3Q8N5Y2 521 aaKnown RBP25.76■■□□□ 1.71
CPNE1-220ENST00000458038 APPBP2Q92624 585 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.76■■□□□ 1.71
CPNE1-220ENST00000458038 DCTPP1Q9H773 170 aa25.76■■□□□ 1.71
CPNE1-220ENST00000458038 ROBO3Q96MS0 1386 aa25.75■■□□□ 1.71
CPNE1-220ENST00000458038 RASA1P20936 1047 aa25.75■■□□□ 1.71
CPNE1-220ENST00000458038 ADCYAP1R1P41586 468 aa25.75■■□□□ 1.71
CPNE1-220ENST00000458038 REPS2Q8NFH8 660 aa25.75■■□□□ 1.71
CPNE1-220ENST00000458038 SLF1Q9BQI6 1058 aa25.75■■□□□ 1.71
CPNE1-220ENST00000458038 POTEB2H3BUK9 544 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 DLL1O00548 723 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 RNF113AO15541 343 aaKnown RBP25.74■■□□□ 1.71
CPNE1-220ENST00000458038 MYCNP04198 464 aaPredicted RBP25.74■■□□□ 1.71
CPNE1-220ENST00000458038 RNF180Q86T96 592 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 PRPF38AQ8NAV1 312 aaKnown RBP25.74■■□□□ 1.71
CPNE1-220ENST00000458038 TEX13BQ9BXU2 312 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 XPNPEP3Q9NQH7 507 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 SYNPO2Q9UMS6 1093 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 PHF24Q9UPV7 400 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 LTBP2Q14767 1821 aa25.74■■□□□ 1.71
CPNE1-220ENST00000458038 PGK2P07205 417 aa25.73■■□□□ 1.71
CPNE1-220ENST00000458038 FAM47AQ5JRC9 791 aa25.73■■□□□ 1.71
CPNE1-220ENST00000458038 C20orf194Q5TEA3 1177 aa25.73■■□□□ 1.71
CPNE1-220ENST00000458038 OSBP2Q969R2 916 aa25.73■■□□□ 1.71
CPNE1-220ENST00000458038 CNPY2Q9Y2B0 182 aa25.73■■□□□ 1.71
CPNE1-220ENST00000458038 MINDY4BA8MYZ0 360 aa25.72■■□□□ 1.71
CPNE1-220ENST00000458038 F5H6K3 240 aa25.72■■□□□ 1.71
CPNE1-220ENST00000458038 KLRC3Q07444 240 aa25.72■■□□□ 1.71
CPNE1-220ENST00000458038 ZNF444Q8N0Y2 327 aaPredicted RBP25.72■■□□□ 1.71
CPNE1-220ENST00000458038 MYH4Q9Y623 1939 aa25.72■■□□□ 1.71
CPNE1-220ENST00000458038 ATP2A1O14983 1001 aa25.71■■□□□ 1.71
CPNE1-220ENST00000458038 AKR1A1P14550 325 aa25.71■■□□□ 1.71
CPNE1-220ENST00000458038 TRIM60Q495X7 471 aa25.71■■□□□ 1.71
CPNE1-220ENST00000458038 MKL1Q969V6 931 aa25.71■■□□□ 1.71
CPNE1-220ENST00000458038 TACC3Q9Y6A5 838 aa25.71■■□□□ 1.71
CPNE1-220ENST00000458038 SYNGAP1Q96PV0 1343 aa25.7■■□□□ 1.71
CPNE1-220ENST00000458038 ZBED4O75132 1171 aa25.7■■□□□ 1.7
CPNE1-220ENST00000458038 TDO2P48775 406 aa25.7■■□□□ 1.7
CPNE1-220ENST00000458038 FERMT2Q96AC1 680 aa25.7■■□□□ 1.7
CPNE1-220ENST00000458038 DDX11Q96FC9 970 aa25.7■■□□□ 1.7
CPNE1-220ENST00000458038 TSEN34Q9BSV6 310 aaKnown RBP25.7■■□□□ 1.7
CPNE1-220ENST00000458038 PRDM5Q9NQX1 630 aaPredicted RBP25.7■■□□□ 1.7
CPNE1-220ENST00000458038 CLIP2Q9UDT6 1046 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms