RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 C3orf67Q6ZVT6 689 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 ADGRA1Q86SQ6 560 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 SLC51AQ86UW1 340 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
DDR1-240ENST00000454612 RBL2Q08999 1139 aa12.58□□□□□ -0.39
DDR1-240ENST00000454612 E4F1Q66K89 784 aaPredicted RBP12.58□□□□□ -0.39
DDR1-240ENST00000454612 FBXO41Q8TF61 875 aa12.58□□□□□ -0.39
DDR1-240ENST00000454612 NELFBQ8WX92 580 aa12.58□□□□□ -0.39
DDR1-240ENST00000454612 SMARCC1Q92922 1105 aaPredicted RBP12.58□□□□□ -0.39
DDR1-240ENST00000454612 PKD2L1Q9P0L9 805 aa12.58□□□□□ -0.39
DDR1-240ENST00000454612 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 AKR1B10O60218 316 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 IFNAR1P17181 557 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 ZNF76P36508 570 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 MNAT1P51948 309 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 PDE4DQ08499 809 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 ITPK1Q13572 414 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 PLS1Q14651 629 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 ZYXQ15942 572 aaKnown RBP12.58□□□□□ -0.4
DDR1-240ENST00000454612 MSL1Q68DK7 614 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 NELFCDQ8IXH7 590 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 CRACR2AQ9BSW2 395 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
DDR1-240ENST00000454612 FMNL1O95466 1100 aaPredicted RBP12.58□□□□□ -0.4
DDR1-240ENST00000454612 GTF2IP78347 998 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 KANK3Q6NY19 840 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 STAG2Q8N3U4 1231 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 EXOC1Q9NV70 894 aa12.58□□□□□ -0.4
DDR1-240ENST00000454612 RXRBP28702 533 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 CACNB3P54284 484 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 RBM6P78332 1123 aaKnown RBP12.57□□□□□ -0.4
DDR1-240ENST00000454612 CCZ1BP86790 482 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 CCZ1P86791 482 aaPredicted RBP12.57□□□□□ -0.4
DDR1-240ENST00000454612 TBC1D8BQ0IIM8 1120 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 PARP10Q53GL7 1025 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 TBC1D9BQ66K14 1250 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 FOXP4Q8IVH2 680 aaPredicted RBP12.57□□□□□ -0.4
DDR1-240ENST00000454612 BANK1Q8NDB2 785 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 KANSL2Q9H9L4 492 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 ARFGAP3Q9NP61 516 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 SLC16A2P36021 539 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 LRRC41Q15345 812 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 KMT5BQ4FZB7 885 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 SLC39A2Q9NP94 309 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 MRC1P22897 1456 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 CCDC40Q4G0X9 1142 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 GJA10Q969M2 543 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 DISP2A7MBM2 1401 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 PLEKHG2Q9H7P9 1386 aa12.57□□□□□ -0.4
DDR1-240ENST00000454612 SNAP25P60880 206 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 CUL4BQ13620 913 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 EARS2Q5JPH6 523 aaKnown RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 MLKLQ8NB16 471 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 NEK11Q8NG66 645 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 SECISBP2LQ93073 1101 aaKnown RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 NLRC4Q9NPP4 1024 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 CALRP27797 417 aaKnown RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 CSGALNACT2Q8N6G5 542 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 CNBD1Q8NA66 436 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 COA7Q96BR5 231 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 WDR24Q96S15 920 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 SPA17Q15506 151 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 BMP2KQ9NSY1 1161 aaPredicted RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 VPS18Q9P253 973 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 LUC7L2Q9Y383 392 aaKnown RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 CTIFO43310 598 aaKnown RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 CSF1RP07333 972 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 CYP27A1Q02318 531 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 KCTD19Q17RG1 926 aaPredicted RBP12.56□□□□□ -0.4
DDR1-240ENST00000454612 MFSD14BQ5SR56 506 aa12.56□□□□□ -0.4
DDR1-240ENST00000454612 KLRF2D3W0D1 207 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 PSMA7O14818 248 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 ARHGAP6O43182 974 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 SCG2P13521 617 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 BRD2P25440 801 aaKnown RBP12.55□□□□□ -0.4
DDR1-240ENST00000454612 MAEAQ7L5Y9 396 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 CALML4Q96GE6 196 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 RUFY1Q96T51 708 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 RTL9Q8NET4 1388 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 ADAMTS7Q9UKP4 1686 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 SCN11AQ9UI33 1791 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 TRIM37O94972 964 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 PAK1Q13153 545 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 TRAPPC3LQ5T215 181 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 FAM107BQ9H098 131 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 SLURP2P0DP57 97 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 USH1GQ495M9 461 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 TBC1D10BQ4KMP7 808 aaPredicted RBP12.55□□□□□ -0.4
DDR1-240ENST00000454612 CCDC70Q6NSX1 233 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 FAM196AQ6ZSG2 479 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 GIMAP7Q8NHV1 300 aa12.55□□□□□ -0.4
DDR1-240ENST00000454612 FAM84BQ96KN1 310 aaPredicted RBP12.55□□□□□ -0.4
DDR1-240ENST00000454612 CTAGE9A4FU28 777 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms