RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 NEDD4P46934 1319 aa28.27■■■□□ 2.12
C9orf3-207ENST00000445181 MKL1Q969V6 931 aa28.27■■■□□ 2.12
C9orf3-207ENST00000445181 MYH4Q9Y623 1939 aa28.27■■■□□ 2.12
C9orf3-207ENST00000445181 F5H6K3 240 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 FLOT1O75955 427 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 KLRC3Q07444 240 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 COG2Q14746 738 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 SAMD1Q6SPF0 538 aaPredicted RBP28.26■■■□□ 2.11
C9orf3-207ENST00000445181 IL17RBQ9NRM6 502 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 HOXC10Q9NYD6 342 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 GJD2Q9UKL4 321 aa28.26■■■□□ 2.11
C9orf3-207ENST00000445181 INHAP05111 366 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 GJB1P08034 283 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 Q3C1V9 767 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 FAM83BQ5T0W9 1011 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 UNC93B1Q9H1C4 597 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 ANO2Q9NQ90 1003 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 SYNPO2Q9UMS6 1093 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 DOCK3Q8IZD9 2030 aa28.25■■■□□ 2.11
C9orf3-207ENST00000445181 NDUFB10O96000 172 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 ERVK-9P63128 1117 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 ERVK-24P63145 666 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 POTEEQ6S8J3 1075 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 NKX2-3Q8TAU0 364 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 MAP4K1Q92918 833 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 KRT23Q9C075 422 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 CNNM2Q9H8M5 875 aa28.24■■■□□ 2.11
C9orf3-207ENST00000445181 SPDYE16A6NNV3 312 aaPredicted RBP28.23■■■□□ 2.11
C9orf3-207ENST00000445181 NT5C2P49902 561 aa28.23■■■□□ 2.11
C9orf3-207ENST00000445181 CCAR1Q8IX12 1150 aaKnown RBP28.23■■■□□ 2.11
C9orf3-207ENST00000445181 GMCL1P1Q8NEA9 526 aa28.23■■■□□ 2.11
C9orf3-207ENST00000445181 SHISA4Q96DD7 197 aa28.23■■■□□ 2.11
C9orf3-207ENST00000445181 NUP88Q99567 741 aaPredicted RBP28.23■■■□□ 2.11
C9orf3-207ENST00000445181 ISY1Q9ULR0 285 aaKnown RBP28.23■■■□□ 2.11
C9orf3-207ENST00000445181 RABGAP1Q9Y3P9 1069 aa28.23■■■□□ 2.11
C9orf3-207ENST00000445181 RBM8AQ9Y5S9 174 aaKnown RBP28.23■■■□□ 2.11
C9orf3-207ENST00000445181 B4E1Z4 1266 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 KDM4AO75164 1064 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 MAPK4P31152 587 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 GJA8P48165 433 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 SLFN13Q68D06 897 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 LSG1Q9H089 658 aaKnown RBP28.22■■■□□ 2.11
C9orf3-207ENST00000445181 TCP11L1Q9NUJ3 509 aa28.22■■■□□ 2.11
C9orf3-207ENST00000445181 CYP21A2P08686 494 aa28.21■■■□□ 2.11
C9orf3-207ENST00000445181 TRDNQ13061 729 aa28.21■■■□□ 2.11
C9orf3-207ENST00000445181 LBX2Q6XYB7 198 aa28.21■■■□□ 2.11
C9orf3-207ENST00000445181 PORCNQ9H237 461 aa28.21■■■□□ 2.11
C9orf3-207ENST00000445181 DSG3P32926 999 aa28.2■■■□□ 2.1
C9orf3-207ENST00000445181 IQCA1Q86XH1 822 aa28.2■■■□□ 2.1
C9orf3-207ENST00000445181 CHMP4CQ96CF2 233 aa28.2■■■□□ 2.1
C9orf3-207ENST00000445181 ZKSCAN3Q9BRR0 538 aa28.2■■■□□ 2.1
C9orf3-207ENST00000445181 MTMR7Q9Y216 660 aa28.2■■■□□ 2.1
C9orf3-207ENST00000445181 CNMDO75829 334 aa28.19■■■□□ 2.1
C9orf3-207ENST00000445181 CCNA1P78396 465 aa28.19■■■□□ 2.1
C9orf3-207ENST00000445181 U2AF1L4Q8WU68 220 aaKnown RBP28.19■■■□□ 2.1
C9orf3-207ENST00000445181 ATG4CQ96DT6 458 aa28.19■■■□□ 2.1
C9orf3-207ENST00000445181 NUDT12Q9BQG2 462 aa28.19■■■□□ 2.1
C9orf3-207ENST00000445181 CWC22Q9HCG8 908 aaKnown RBP28.19■■■□□ 2.1
C9orf3-207ENST00000445181 FBXO28Q9NVF7 368 aa28.19■■■□□ 2.1
C9orf3-207ENST00000445181 TOP1P11387 765 aaKnown RBP28.18■■■□□ 2.1
C9orf3-207ENST00000445181 CYP2B6P20813 491 aa28.18■■■□□ 2.1
C9orf3-207ENST00000445181 CCDC178Q5BJE1 867 aa28.18■■■□□ 2.1
C9orf3-207ENST00000445181 MB21D1Q8N884 522 aa28.18■■■□□ 2.1
C9orf3-207ENST00000445181 SOCS4Q8WXH5 440 aa28.18■■■□□ 2.1
C9orf3-207ENST00000445181 BTBD7Q9P203 1132 aa28.18■■■□□ 2.1
C9orf3-207ENST00000445181 SGPL1O95470 568 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 HMGCRP04035 888 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 BMP3P12645 472 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 MCCP23508 829 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 SLC1A4P43007 532 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 NOVP48745 357 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 GPR142Q7Z601 462 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 PLEKHH3Q7Z736 793 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 TTC14Q96N46 770 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 SLF1Q9BQI6 1058 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 TMEM47Q9BQJ4 181 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 ZSWIM5Q9P217 1185 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 PPP1R9AQ9ULJ8 1098 aa28.17■■■□□ 2.1
C9orf3-207ENST00000445181 PLS1Q14651 629 aa28.16■■■□□ 2.1
C9orf3-207ENST00000445181 RALYLQ86SE5 291 aaKnown RBP28.16■■■□□ 2.1
C9orf3-207ENST00000445181 GMCL1Q96IK5 515 aa28.16■■■□□ 2.1
C9orf3-207ENST00000445181 DEFB118Q96PH6 123 aa28.16■■■□□ 2.1
C9orf3-207ENST00000445181 ZSCAN10Q96SZ4 725 aaPredicted RBP28.16■■■□□ 2.1
C9orf3-207ENST00000445181 UBAC1Q9BSL1 405 aa28.16■■■□□ 2.1
C9orf3-207ENST00000445181 E7EWF7 191 aa28.15■■■□□ 2.1
C9orf3-207ENST00000445181 IKQ13123 557 aaPredicted RBP28.15■■■□□ 2.1
C9orf3-207ENST00000445181 WDR78Q5VTH9 848 aa28.15■■■□□ 2.1
C9orf3-207ENST00000445181 PAK6Q9NQU5 681 aaPredicted RBP28.15■■■□□ 2.1
C9orf3-207ENST00000445181 FEM1BQ9UK73 627 aa28.15■■■□□ 2.1
C9orf3-207ENST00000445181 BRCA2P51587 3418 aa28.15■■■□□ 2.1
C9orf3-207ENST00000445181 RLFQ13129 1914 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 PLXNB2O15031 1838 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 TFRCP02786 760 aaKnown RBP28.14■■■□□ 2.1
C9orf3-207ENST00000445181 XRCC5P13010 732 aaKnown RBP28.14■■■□□ 2.1
C9orf3-207ENST00000445181 TRIM32Q13049 653 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 MORN1Q5T089 497 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 DGKHQ86XP1 1220 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 PRPF38AQ8NAV1 312 aaKnown RBP28.14■■■□□ 2.1
C9orf3-207ENST00000445181 NCOA7Q8NI08 942 aa28.14■■■□□ 2.1
C9orf3-207ENST00000445181 TRIB2Q92519 343 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms