RNA–Protein interactions for RNA: ENST00000443197.5

CALD1-210, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-210ENST00000443197 MLKLQ8NB16 471 aa11.95□□□□□ -0.5
CALD1-210ENST00000443197 SUPT20HQ8NEM7 779 aa11.95□□□□□ -0.5
CALD1-210ENST00000443197 PSTPIP2Q9H939 334 aa11.95□□□□□ -0.5
CALD1-210ENST00000443197 TCRBV5S4A2TA0A5A2 114 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 KIF4BQ2VIQ3 1234 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 POLLQ9UGP5 575 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 SCAF8Q9UPN6 1271 aaKnown RBP11.94□□□□□ -0.5
CALD1-210ENST00000443197 PCDHA1Q9Y5I3 950 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 ABCB5Q2M3G0 1257 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 SV2BQ7L1I2 683 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 TMC4Q7Z404 712 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 COL23A1Q86Y22 540 aaPredicted RBP11.94□□□□□ -0.5
CALD1-210ENST00000443197 ARHGEF10LQ9HCE6 1279 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 TTLL1O95922 423 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 CRKP46108 304 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 ZNF397Q8NF99 534 aaPredicted RBP11.94□□□□□ -0.5
CALD1-210ENST00000443197 RIOK1Q9BRS2 568 aaKnown RBP11.94□□□□□ -0.5
CALD1-210ENST00000443197 WDR19Q8NEZ3 1342 aa11.94□□□□□ -0.5
CALD1-210ENST00000443197 FOXN1O15353 648 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 NEK8Q86SG6 692 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 LZTFL1Q9NQ48 299 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 SYNRGQ9UMZ2 1314 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 GOLGA8FQ08AF8 430 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 GOLGA8DPQ0D2H9 430 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 SP8Q8IXZ3 490 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 ERMNQ8TAM6 284 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 ZBTB9Q96C00 473 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 TAB2Q9NYJ8 693 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 PYCARDQ9ULZ3 195 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 PCDHA4Q9UN74 947 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 DDX39AO00148 427 aaKnown RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 ECE2O60344 883 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 ATP1A3P13637 1013 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 UBE2SQ16763 222 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 NCAPH2Q6IBW4 605 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 FMR1NBQ8N0W7 255 aaPredicted RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 TDRD7Q8NHU6 1098 aaKnown RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 TSC1Q92574 1164 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 UBXN4Q92575 508 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 DAGLAQ9Y4D2 1042 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 MRC1P22897 1456 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 TBCAO75347 108 aaKnown RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 ADKP55263 362 aaKnown RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 ARID5AQ03989 594 aa11.93□□□□□ -0.5
CALD1-210ENST00000443197 ZNF277Q9NRM2 450 aaPredicted RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
CALD1-210ENST00000443197 UBXN2AP68543 259 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 CTAGE1Q96RT6 745 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 RGPD1P0DJD0 1748 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 KIF5CO60282 957 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 AKR1B1P15121 316 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 EVX2Q03828 476 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 SHC4Q6S5L8 630 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 MAEAQ7L5Y9 396 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 DEFB132Q7Z7B7 95 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 TTLL6Q8N841 843 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 IGSF22Q8N9C0 903 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 PRR16Q569H4 304 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 CCDC70Q6NSX1 233 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 SYT10Q6XYQ8 523 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 USP49Q70CQ1 688 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
CALD1-210ENST00000443197 RIC1Q4ADV7 1423 aa11.92□□□□□ -0.5
CALD1-210ENST00000443197 OR52Z1P0C646 297 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 CASQ1P31415 396 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 SPAG1Q07617 926 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 PAK1Q13153 545 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 SPA17Q15506 151 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 SYCP3Q8IZU3 236 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 CSGALNACT2Q8N6G5 542 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.91□□□□□ -0.5
CALD1-210ENST00000443197 EHMT1Q9H9B1 1298 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 MATR3P43243 847 aaKnown RBP eCLIP11.91□□□□□ -0.5
CALD1-210ENST00000443197 TEX35Q5T0J7 233 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 CC2D2BQ6DHV5 1058 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 PODNQ7Z5L7 613 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 NELFBQ8WX92 580 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 PI4KBQ9UBF8 816 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 SRPRBQ9Y5M8 271 aaKnown RBP11.91□□□□□ -0.5
CALD1-210ENST00000443197 FGFR1OPO95684 399 aaKnown RBP11.91□□□□□ -0.5
CALD1-210ENST00000443197 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
CALD1-210ENST00000443197 GRIK5Q16478 980 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 NSMFQ6X4W1 530 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.91□□□□□ -0.5
CALD1-210ENST00000443197 NELFCDQ8IXH7 590 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 CRAMP1Q96RY5 1269 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 PCDHA12Q9UN75 941 aa11.91□□□□□ -0.5
CALD1-210ENST00000443197 TRAF5O00463 557 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 GH2P01242 217 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 PTPREP23469 700 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 SEPT2Q15019 361 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 CT47A1Q5JQC4 288 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 SLC51AQ86UW1 340 aa11.9□□□□□ -0.5
CALD1-210ENST00000443197 BAG1Q99933 345 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
CALD1-210ENST00000443197 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms