RNA–Protein interactions for RNA: ENST00000435354.1

LINC01006-204, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 2 BASIC

Gene LINC01006, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-204ENST00000435354 NCAPG2Q86XI2 1143 aa17.19■□□□□ 0.34
LINC01006-204ENST00000435354 MROH8Q9H579 483 aa17.19■□□□□ 0.34
LINC01006-204ENST00000435354 GOPCQ9HD26 462 aa17.19■□□□□ 0.34
LINC01006-204ENST00000435354 DDX20Q9UHI6 824 aaKnown RBP17.19■□□□□ 0.34
LINC01006-204ENST00000435354 SALL3Q9BXA9 1300 aa17.19■□□□□ 0.34
LINC01006-204ENST00000435354 MYH4Q9Y623 1939 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 ERC2O15083 957 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 CYBAP13498 195 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 GNAT2P19087 354 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 FAM83BQ5T0W9 1011 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 ABRAQ8N0Z2 381 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 SEC62Q99442 399 aaKnown RBP17.18■□□□□ 0.34
LINC01006-204ENST00000435354 MKNK2Q9HBH9 465 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 PPP1R9AQ9ULJ8 1098 aa17.18■□□□□ 0.34
LINC01006-204ENST00000435354 LAMA3Q16787 3333 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 VWA5AO00534 786 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 MX1P20591 662 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 CNGA1P29973 690 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 TDO2P48775 406 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 LRRC26Q2I0M4 334 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 REPS2Q8NFH8 660 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 CRBNQ96SW2 442 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 NUP88Q99567 741 aaPredicted RBP17.17■□□□□ 0.34
LINC01006-204ENST00000435354 GDF15Q99988 308 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 NYAP2Q9P242 653 aa17.17■□□□□ 0.34
LINC01006-204ENST00000435354 ZNF214Q9UL59 606 aaPredicted RBP17.17■□□□□ 0.34
LINC01006-204ENST00000435354 A0A1W2PPC1 479 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 PATL2C9JE40 543 aaKnown RBP17.16■□□□□ 0.34
LINC01006-204ENST00000435354 RAD21O60216 631 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 PRDM1O75626 825 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 APPP05067 770 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 SYN1P17600 705 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 ZMYM1Q5SVZ6 1142 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 IFNL3Q8IZI9 196 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
LINC01006-204ENST00000435354 MSCO60682 206 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 SLC25A27O95847 323 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 NDUFB10O96000 172 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 FCER1AP12319 257 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 LRRFIP1Q32MZ4 808 aaKnown RBP17.15■□□□□ 0.34
LINC01006-204ENST00000435354 RIOX2Q8IUF8 465 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 MAML3Q96JK9 1138 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 PLXNA1Q9UIW2 1896 aa17.15■□□□□ 0.34
LINC01006-204ENST00000435354 F5H6K3 240 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 SOX1O00570 391 aaPredicted RBP17.14■□□□□ 0.33
LINC01006-204ENST00000435354 FOXP2O15409 715 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 STAT3P40763 770 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 KLRC3Q07444 240 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 PRAMEF19Q5SWL8 479 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 CEP95Q96GE4 821 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 SLF1Q9BQI6 1058 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 CLIP2Q9UDT6 1046 aa17.14■□□□□ 0.33
LINC01006-204ENST00000435354 SMCHD1A6NHR9 2005 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 PGK2P07205 417 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 BMP8BP34820 402 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 MAGEA10P43363 369 aaPredicted RBP17.13■□□□□ 0.33
LINC01006-204ENST00000435354 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 MMP19Q99542 508 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 NACAP1Q9BZK3 213 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 SENP6Q9GZR1 1112 aaPredicted RBP17.13■□□□□ 0.33
LINC01006-204ENST00000435354 MTMR4Q9NYA4 1195 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 PLIN4Q96Q06 1357 aa17.13■□□□□ 0.33
LINC01006-204ENST00000435354 DNM1LO00429 736 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 SEPT4O43236 478 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
LINC01006-204ENST00000435354 CCDC129Q6ZRS4 1044 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 ZNF444Q8N0Y2 327 aaPredicted RBP17.12■□□□□ 0.33
LINC01006-204ENST00000435354 MKL1Q969V6 931 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 ZNF287Q9HBT7 754 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 DNAH12Q6ZR08 3092 aa17.12■□□□□ 0.33
LINC01006-204ENST00000435354 PPARAQ07869 468 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 KCTD2Q14681 263 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 ZNF792Q3KQV3 632 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 GJC2Q5T442 439 aaPredicted RBP17.11■□□□□ 0.33
LINC01006-204ENST00000435354 LRRC47Q8N1G4 583 aaKnown RBP17.11■□□□□ 0.33
LINC01006-204ENST00000435354 NEDD1Q8NHV4 660 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 TEX13BQ9BXU2 312 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 NAPBQ9H115 298 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 RIPK3Q9Y572 518 aa17.11■□□□□ 0.33
LINC01006-204ENST00000435354 TTLL1O95922 423 aa17.1■□□□□ 0.33
LINC01006-204ENST00000435354 COPB2P35606 906 aa17.1■□□□□ 0.33
LINC01006-204ENST00000435354 ATN1P54259 1190 aaPredicted RBP17.1■□□□□ 0.33
LINC01006-204ENST00000435354 FAM47AQ5JRC9 791 aa17.1■□□□□ 0.33
LINC01006-204ENST00000435354 SNRNP48Q6IEG0 339 aaKnown RBP17.1■□□□□ 0.33
LINC01006-204ENST00000435354 PRPF38AQ8NAV1 312 aaKnown RBP17.1■□□□□ 0.33
LINC01006-204ENST00000435354 GMCL1P1Q8NEA9 526 aa17.1■□□□□ 0.33
LINC01006-204ENST00000435354 LRCH3Q96II8 777 aa17.1■□□□□ 0.33
LINC01006-204ENST00000435354 DIS3Q9Y2L1 958 aaKnown RBP17.1■□□□□ 0.33
LINC01006-204ENST00000435354 PDE1AP54750 535 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 TFAP4Q01664 338 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 PDE4BQ07343 736 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 ARRDC4Q8NCT1 418 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 TINF2Q9BSI4 451 aa17.09■□□□□ 0.33
LINC01006-204ENST00000435354 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
LINC01006-204ENST00000435354 TACC3Q9Y6A5 838 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms