RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 ARRDC4Q8NCT1 418 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 TRPV1Q8NER1 839 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 APPBP2Q92624 585 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 STRBPQ96SI9 672 aaKnown RBP17.85■□□□□ 0.45
MSH5-208ENST00000429846 UBE2OQ9C0C9 1292 aaKnown RBP17.85■□□□□ 0.45
MSH5-208ENST00000429846 SENP6Q9GZR1 1112 aaPredicted RBP17.85■□□□□ 0.45
MSH5-208ENST00000429846 DCTPP1Q9H773 170 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 PLXNA1Q9UIW2 1896 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 LAMA3Q16787 3333 aa17.85■□□□□ 0.45
MSH5-208ENST00000429846 SMIM22K7EJ46 135 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 COBLO75128 1261 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 TMEM132BQ14DG7 1078 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 LRRFIP1Q32MZ4 808 aaKnown RBP17.84■□□□□ 0.45
MSH5-208ENST00000429846 MAML3Q96JK9 1138 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 PPP1R9AQ9ULJ8 1098 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
MSH5-208ENST00000429846 KBTBD13C9JR72 458 aa17.83■□□□□ 0.44
MSH5-208ENST00000429846 GNAT2P19087 354 aa17.83■□□□□ 0.44
MSH5-208ENST00000429846 RIOX2Q8IUF8 465 aa17.83■□□□□ 0.44
MSH5-208ENST00000429846 ZNF287Q9HBT7 754 aa17.83■□□□□ 0.44
MSH5-208ENST00000429846 LTBP2Q14767 1821 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 VWA5AO00534 786 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 RNF113AO15541 343 aaKnown RBP17.82■□□□□ 0.44
MSH5-208ENST00000429846 KCTD2Q14681 263 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 SAMD1Q6SPF0 538 aaPredicted RBP17.82■□□□□ 0.44
MSH5-208ENST00000429846 OSBP2Q969R2 916 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 MMP19Q99542 508 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 MKNK2Q9HBH9 465 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 NYAP2Q9P242 653 aa17.82■□□□□ 0.44
MSH5-208ENST00000429846 ZNF214Q9UL59 606 aaPredicted RBP17.82■□□□□ 0.44
MSH5-208ENST00000429846 DIS3Q9Y2L1 958 aaKnown RBP17.82■□□□□ 0.44
MSH5-208ENST00000429846 TTC41PQ6P2S7 1318 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 RASA1P20936 1047 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 STAT3P40763 770 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 FAM83BQ5T0W9 1011 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.81■□□□□ 0.44
MSH5-208ENST00000429846 FBXO28Q9NVF7 368 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 PRKAG2Q9UGJ0 569 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 SYNPO2Q9UMS6 1093 aa17.81■□□□□ 0.44
MSH5-208ENST00000429846 GPAA1O43292 621 aa17.8■□□□□ 0.44
MSH5-208ENST00000429846 RAD21O60216 631 aa17.8■□□□□ 0.44
MSH5-208ENST00000429846 ATN1P54259 1190 aaPredicted RBP17.8■□□□□ 0.44
MSH5-208ENST00000429846 GJC2Q5T442 439 aaPredicted RBP17.8■□□□□ 0.44
MSH5-208ENST00000429846 REPS2Q8NFH8 660 aa17.8■□□□□ 0.44
MSH5-208ENST00000429846 LBHD1Q9BQE6 289 aaPredicted RBP17.8■□□□□ 0.44
MSH5-208ENST00000429846 SLF1Q9BQI6 1058 aa17.8■□□□□ 0.44
MSH5-208ENST00000429846 MINDY4BA8MYZ0 360 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 ERC2O15083 957 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 TDO2P48775 406 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 RTP1P59025 263 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 MDM2Q00987 491 aaPredicted RBP17.79■□□□□ 0.44
MSH5-208ENST00000429846 SNX17Q15036 470 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 TEX13BQ9BXU2 312 aa17.79■□□□□ 0.44
MSH5-208ENST00000429846 EPB41L4AQ9HCS5 686 aaPredicted RBP17.79■□□□□ 0.44
MSH5-208ENST00000429846 SMCHD1A6NHR9 2005 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 F5H6K3 240 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 KLRC3Q07444 240 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 FAM47AQ5JRC9 791 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 C1orf53Q5VUE5 145 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 TSHZ3Q63HK5 1081 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 SLC39A5Q6ZMH5 540 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 MSL3Q8N5Y2 521 aaKnown RBP17.78■□□□□ 0.44
MSH5-208ENST00000429846 DEFB123Q8N688 67 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
MSH5-208ENST00000429846 TINF2Q9BSI4 451 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 NACAP1Q9BZK3 213 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 PLIN4Q96Q06 1357 aa17.78■□□□□ 0.44
MSH5-208ENST00000429846 IGKV6D-41A0A0C4DH26 115 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 ATP2A1O14983 1001 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 NDUFB10O96000 172 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 APPP05067 770 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 PGK2P07205 417 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 RARBP10826 455 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 LRRC41Q15345 812 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 ZNF792Q3KQV3 632 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 ANO1Q5XXA6 986 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 ZNF444Q8N0Y2 327 aaPredicted RBP17.77■□□□□ 0.44
MSH5-208ENST00000429846 ATP11BQ9Y2G3 1177 aa17.77■□□□□ 0.44
MSH5-208ENST00000429846 PATL2C9JE40 543 aaKnown RBP17.76■□□□□ 0.43
MSH5-208ENST00000429846 M0R2C6 588 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 AKR1A1P14550 325 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 PRAMEF19Q5SWL8 479 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 SNRNP48Q6IEG0 339 aaKnown RBP17.76■□□□□ 0.43
MSH5-208ENST00000429846 IFNL3Q8IZI9 196 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 MKL1Q969V6 931 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 NUP88Q99567 741 aaPredicted RBP17.76■□□□□ 0.43
MSH5-208ENST00000429846 XPNPEP3Q9NQH7 507 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 CNPY2Q9Y2B0 182 aa17.76■□□□□ 0.43
MSH5-208ENST00000429846 SYNGAP1Q96PV0 1343 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 TTLL1O95922 423 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 MYCNP04198 464 aaPredicted RBP17.75■□□□□ 0.43
MSH5-208ENST00000429846 PDE4BQ07343 736 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.75■□□□□ 0.43
MSH5-208ENST00000429846 RNF180Q86T96 592 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 STK11IPQ8N1F8 1099 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 GMCL1P1Q8NEA9 526 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 PI4K2BQ8TCG2 481 aa17.75■□□□□ 0.43
MSH5-208ENST00000429846 CEP95Q96GE4 821 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms