RNA–Protein interactions for RNA: ENST00000426722.5

NELFE-203, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-203ENST00000426722 MDM2Q00987 491 aaPredicted RBP15.46■□□□□ 0.07
NELFE-203ENST00000426722 TMEM132BQ14DG7 1078 aa15.46■□□□□ 0.07
NELFE-203ENST00000426722 SLFNL1Q499Z3 407 aa15.46■□□□□ 0.07
NELFE-203ENST00000426722 SBK1Q52WX2 424 aa15.46■□□□□ 0.07
NELFE-203ENST00000426722 SLC39A5Q6ZMH5 540 aa15.46■□□□□ 0.07
NELFE-203ENST00000426722 PUS7LQ9H0K6 701 aaKnown RBP15.46■□□□□ 0.07
NELFE-203ENST00000426722 ECHDC1Q9NTX5 307 aa15.46■□□□□ 0.07
NELFE-203ENST00000426722 GREB1LQ9C091 1923 aaPredicted RBP15.46■□□□□ 0.07
NELFE-203ENST00000426722 SZT2Q5T011 3432 aa15.46■□□□□ 0.06
NELFE-203ENST00000426722 SMCHD1A6NHR9 2005 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 CYP2D7A0A087X1C5 515 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 ATN1P54259 1190 aaPredicted RBP15.45■□□□□ 0.06
NELFE-203ENST00000426722 GJC2Q5T442 439 aaPredicted RBP15.45■□□□□ 0.06
NELFE-203ENST00000426722 C1orf53Q5VUE5 145 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 CLEC10AQ8IUN9 316 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 MMP19Q99542 508 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 PPP1R9AQ9ULJ8 1098 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 STXBP5LQ9Y2K9 1186 aa15.45■□□□□ 0.06
NELFE-203ENST00000426722 VWA5AO00534 786 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 STAT3P40763 770 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 KCTD2Q14681 263 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 SNX17Q15036 470 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 FAM109BQ6ICB4 259 aaPredicted RBP15.44■□□□□ 0.06
NELFE-203ENST00000426722 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 GPATCH3Q96I76 525 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 STRBPQ96SI9 672 aaKnown RBP15.44■□□□□ 0.06
NELFE-203ENST00000426722 MTMR10Q9NXD2 777 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 NYAP2Q9P242 653 aa15.44■□□□□ 0.06
NELFE-203ENST00000426722 LTBP2Q14767 1821 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 RANBP2P49792 3224 aaKnown RBP15.43■□□□□ 0.06
NELFE-203ENST00000426722 ZFYP08048 801 aaPredicted RBP15.43■□□□□ 0.06
NELFE-203ENST00000426722 GNAT2P19087 354 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 LRRFIP1Q32MZ4 808 aaKnown RBP15.43■□□□□ 0.06
NELFE-203ENST00000426722 ZNF792Q3KQV3 632 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 SAMD1Q6SPF0 538 aaPredicted RBP15.43■□□□□ 0.06
NELFE-203ENST00000426722 MSL3Q8N5Y2 521 aaKnown RBP15.43■□□□□ 0.06
NELFE-203ENST00000426722 APPBP2Q92624 585 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 TINF2Q9BSI4 451 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 MKNK2Q9HBH9 465 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 ZNF287Q9HBT7 754 aa15.43■□□□□ 0.06
NELFE-203ENST00000426722 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 SMIM22K7EJ46 135 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 CHGBP05060 677 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 RARBP10826 455 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 LRRC41Q15345 812 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 PRAMEF19Q5SWL8 479 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 REPS2Q8NFH8 660 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 DCTPP1Q9H773 170 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 FBXO28Q9NVF7 368 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 ZNF214Q9UL59 606 aaPredicted RBP15.42■□□□□ 0.06
NELFE-203ENST00000426722 SYNPO2Q9UMS6 1093 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 ATP11BQ9Y2G3 1177 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 MYH4Q9Y623 1939 aa15.42■□□□□ 0.06
NELFE-203ENST00000426722 GSG1L2A8MUP6 293 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 POTEB2H3BUK9 544 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 SMARCA5O60264 1052 aaPredicted RBP15.41■□□□□ 0.06
NELFE-203ENST00000426722 RASA1P20936 1047 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 FAM83BQ5T0W9 1011 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 ANO1Q5XXA6 986 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 Q7L0L9 218 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 RNF180Q86T96 592 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 SLF1Q9BQI6 1058 aa15.41■□□□□ 0.06
NELFE-203ENST00000426722 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.41■□□□□ 0.06
NELFE-203ENST00000426722 MINDY4BA8MYZ0 360 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 F5H6K3 240 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 DLL1O00548 723 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 ATP2A1O14983 1001 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 RNF113AO15541 343 aaKnown RBP15.4■□□□□ 0.06
NELFE-203ENST00000426722 RAD21O60216 631 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 AKR1A1P14550 325 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 ADCYAP1R1P41586 468 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 KLRC3Q07444 240 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 FAM47AQ5JRC9 791 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 ZNF444Q8N0Y2 327 aaPredicted RBP15.4■□□□□ 0.06
NELFE-203ENST00000426722 PRPF38AQ8NAV1 312 aaKnown RBP15.4■□□□□ 0.06
NELFE-203ENST00000426722 MKL1Q969V6 931 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 TEX13BQ9BXU2 312 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 XPNPEP3Q9NQH7 507 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
NELFE-203ENST00000426722 MYCNP04198 464 aaPredicted RBP15.39■□□□□ 0.05
NELFE-203ENST00000426722 PGK2P07205 417 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 ZNF865P0CJ78 1059 aaPredicted RBP15.39■□□□□ 0.05
NELFE-203ENST00000426722 TRIM60Q495X7 471 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.39■□□□□ 0.05
NELFE-203ENST00000426722 OSBP2Q969R2 916 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 TSEN34Q9BSV6 310 aaKnown RBP15.39■□□□□ 0.05
NELFE-203ENST00000426722 CNPY2Q9Y2B0 182 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 CTDP1Q9Y5B0 961 aaPredicted RBP15.39■□□□□ 0.05
NELFE-203ENST00000426722 TACC3Q9Y6A5 838 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 SYNGAP1Q96PV0 1343 aa15.39■□□□□ 0.05
NELFE-203ENST00000426722 IGKV6D-41A0A0C4DH26 115 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 PATL2C9JE40 543 aaKnown RBP15.38■□□□□ 0.05
NELFE-203ENST00000426722 GPAA1O43292 621 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 ZBED4O75132 1171 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 FDX1P10109 184 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 MAMDC4Q6UXC1 1216 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 ZNF467Q7Z7K2 595 aaPredicted RBP15.38■□□□□ 0.05
NELFE-203ENST00000426722 DDX11Q96FC9 970 aa15.38■□□□□ 0.05
NELFE-203ENST00000426722 PRDM5Q9NQX1 630 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms