RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ADCY3O60266 1144 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 RANBP6O60518 1105 aaKnown RBP16.16■□□□□ 0.18
SNX3-204ENST00000426155 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
SNX3-204ENST00000426155 KLRC3Q07444 240 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 CHRDL2Q6WN34 429 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
SNX3-204ENST00000426155 IL17RBQ9NRM6 502 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 GJD2Q9UKL4 321 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 NEDD4P46934 1319 aa16.16■□□□□ 0.18
SNX3-204ENST00000426155 ZNF236Q9UL36 1845 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 ORC4O43929 436 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 TTLL1O95922 423 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 CHMLP26374 656 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 RGS19P49795 217 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 WDR78Q5VTH9 848 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 GPR142Q7Z601 462 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 NBPF11Q86T75 865 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 SLAIN1Q8ND83 568 aa16.15■□□□□ 0.18
SNX3-204ENST00000426155 MKI67P46013 3256 aaKnown RBP16.15■□□□□ 0.18
SNX3-204ENST00000426155 ZNFX1Q9P2E3 1918 aaKnown RBP16.15■□□□□ 0.18
SNX3-204ENST00000426155 FGRP09769 529 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 CYP2B6P20813 491 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 MAPK4P31152 587 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 IRF5Q13568 498 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 CCAR1Q8IX12 1150 aaKnown RBP16.14■□□□□ 0.17
SNX3-204ENST00000426155 BIN2Q9UBW5 565 aaPredicted RBP16.14■□□□□ 0.17
SNX3-204ENST00000426155 STX8Q9UNK0 236 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 PLXNA1Q9UIW2 1896 aa16.14■□□□□ 0.17
SNX3-204ENST00000426155 INHAP05111 366 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 EN2P19622 333 aaPredicted RBP16.13■□□□□ 0.17
SNX3-204ENST00000426155 TRIM32Q13049 653 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 PLS1Q14651 629 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 AKNAD1Q5T1N1 836 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 PLEKHH3Q7Z736 793 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 STAG1Q8WVM7 1258 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 MKL1Q969V6 931 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 DSCC1Q9BVC3 393 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 MOV10L1Q9BXT6 1211 aaKnown RBP16.13■□□□□ 0.17
SNX3-204ENST00000426155 SPATC1LQ9H0A9 340 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 HOXC10Q9NYD6 342 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 PPP1R9AQ9ULJ8 1098 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 RAD50Q92878 1312 aa16.13■□□□□ 0.17
SNX3-204ENST00000426155 FRMPD3Q5JV73 1810 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 MLLT1Q03111 559 aaPredicted RBP16.12■□□□□ 0.17
SNX3-204ENST00000426155 TMEM132BQ14DG7 1078 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 SLFN13Q68D06 897 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 TRIB2Q92519 343 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 UNC93B1Q9H1C4 597 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 CWC22Q9HCG8 908 aaKnown RBP16.12■□□□□ 0.17
SNX3-204ENST00000426155 MTMR7Q9Y216 660 aa16.12■□□□□ 0.17
SNX3-204ENST00000426155 ZNF213O14771 459 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 CCL5P13501 91 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 CCNA1P78396 465 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 PTH1RQ03431 593 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 CCL14Q16627 93 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 MORN1Q5T089 497 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 MFSD6Q6ZSS7 791 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 GMCL1P1Q8NEA9 526 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 REPS2Q8NFH8 660 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 PXYLP1Q8TE99 480 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 SOCS4Q8WXH5 440 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 USP6NLQ92738 828 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 NUDT12Q9BQG2 462 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 ZKSCAN3Q9BRR0 538 aa16.11■□□□□ 0.17
SNX3-204ENST00000426155 ISY1Q9ULR0 285 aaKnown RBP16.11■□□□□ 0.17
SNX3-204ENST00000426155 VWA5AO00534 786 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 ERCC3P19447 782 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 KIFC2Q96AC6 838 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 SHISA4Q96DD7 197 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 SLF1Q9BQI6 1058 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 TMEM106CQ9BVX2 250 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 ADAMTS5Q9UNA0 930 aa16.1■□□□□ 0.17
SNX3-204ENST00000426155 SGSM2O43147 1006 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 HMGCRP04035 888 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 NEFLP07196 543 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 BMP3P12645 472 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 PTPREP23469 700 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 MCCP23508 829 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 NOVP48745 357 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 UBXN2AP68543 259 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 MAP2K5Q13163 448 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 IMMTQ16891 758 aaKnown RBP16.09■□□□□ 0.17
SNX3-204ENST00000426155 RCSD1Q6JBY9 416 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 KCTD1Q719H9 257 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 NCAPG2Q86XI2 1143 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 MB21D1Q8N884 522 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 APBA2Q99767 749 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 RNF208Q9H0X6 261 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 ZNF214Q9UL59 606 aaPredicted RBP16.09■□□□□ 0.17
SNX3-204ENST00000426155 SYNPO2Q9UMS6 1093 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 TAF6LQ9Y6J9 622 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 SMCHD1A6NHR9 2005 aa16.09■□□□□ 0.17
SNX3-204ENST00000426155 B4E1Z4 1266 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 TMEM232C9JQI7 657 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 KDM4AO75164 1064 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 RGS2P41220 211 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 SLC1A4P43007 532 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 GRB14Q14449 540 aa16.08■□□□□ 0.16
SNX3-204ENST00000426155 NPLOC4Q8TAT6 608 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms