RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 OSBPL5Q9H0X9 879 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-202ENST00000424011 KCNF1Q9H3M0 494 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 PIM2Q9P1W9 311 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 SERPINB13Q9UIV8 391 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 PALM3A6NDB9 673 aaPredicted RBP18.91■□□□□ 0.62
CMTM3-202ENST00000424011 PTPREP23469 700 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 PIBF1Q8WXW3 757 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 SHISA4Q96DD7 197 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 NAT10Q9H0A0 1025 aaKnown RBP18.91■□□□□ 0.62
CMTM3-202ENST00000424011 KIAA1468Q9P260 1216 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 FOCADQ5VW36 1801 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 GOLGA6L19H0YKK7 550 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 SMARCA1P28370 1054 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 AOC3Q16853 763 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 DHX40Q8IX18 779 aaKnown RBP18.91■□□□□ 0.62
CMTM3-202ENST00000424011 DDX4Q9NQI0 724 aaKnown RBP18.91■□□□□ 0.62
CMTM3-202ENST00000424011 PCDHB6Q9Y5E3 794 aa18.91■□□□□ 0.62
CMTM3-202ENST00000424011 TRAPPC10P48553 1259 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 GALNT17Q6IS24 598 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 STAG2Q8N3U4 1231 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 PDCL2Q8N4E4 241 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 CEP95Q96GE4 821 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 CLIC6Q96NY7 704 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 PSMD1Q99460 953 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 KCNQ5Q9NR82 932 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 SERPINA10Q9UK55 444 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 SRPRBQ9Y5M8 271 aaKnown RBP18.9■□□□□ 0.62
CMTM3-202ENST00000424011 GOLGA6L6A8MZA4 724 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 PARP1P09874 1014 aaKnown RBP18.9■□□□□ 0.62
CMTM3-202ENST00000424011 PTGER2P43116 358 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 CCDC148Q8NFR7 591 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 TNFRSF25Q93038 417 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 SPZ1Q9BXG8 430 aa18.9■□□□□ 0.62
CMTM3-202ENST00000424011 DHX36Q9H2U1 1008 aaKnown RBP18.9■□□□□ 0.62
CMTM3-202ENST00000424011 FBXO2Q9UK22 296 aaPredicted RBP18.9■□□□□ 0.62
CMTM3-202ENST00000424011 MYH1P12882 1939 aa18.89■□□□□ 0.62
CMTM3-202ENST00000424011 NPY5RQ15761 445 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 ELOA2Q8IYF1 753 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-202ENST00000424011 C17orf53Q8N3J3 647 aaPredicted RBP18.89■□□□□ 0.61
CMTM3-202ENST00000424011 EHD4Q9H223 541 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 HOOK1Q9UJC3 728 aaKnown RBP18.89■□□□□ 0.61
CMTM3-202ENST00000424011 KCNH3Q9ULD8 1083 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 CD2APQ9Y5K6 639 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 MYH6P13533 1939 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 SPDYE4A6NLX3 237 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 KLRF2D3W0D1 207 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 NOLC1Q14978 699 aaKnown RBP eCLIP18.89■□□□□ 0.61
CMTM3-202ENST00000424011 CEP57L1Q8IYX8 460 aa18.89■□□□□ 0.61
CMTM3-202ENST00000424011 BECN2A8MW95 431 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 PPIP5K2O43314 1243 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 NPM3O75607 178 aaKnown RBP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 TPM3P06753 285 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 PTGS1P23219 599 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 SOGA3Q5TF21 947 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 MTMR4Q9NYA4 1195 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 CGNQ9P2M7 1197 aaKnown RBP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 PPP1R1BQ9UD71 204 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 ATP2B1P20020 1258 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 RBM5P52756 815 aaKnown RBP eCLIP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 CCDC12Q8WUD4 166 aaPredicted RBP18.88■□□□□ 0.61
CMTM3-202ENST00000424011 FERMT2Q96AC1 680 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 NRBP1Q9UHY1 535 aa18.88■□□□□ 0.61
CMTM3-202ENST00000424011 DPCR1Q3MIW9 517 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 DALRD3Q5D0E6 543 aaKnown RBP18.87■□□□□ 0.61
CMTM3-202ENST00000424011 SARM1Q6SZW1 724 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 DRC7Q8IY82 874 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 BLIDQ8IZY5 108 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 CCDC17Q96LX7 622 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 IDI2Q9BXS1 227 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 PYCARDQ9ULZ3 195 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 PCDHA4Q9UN74 947 aa18.87■□□□□ 0.61
CMTM3-202ENST00000424011 VGLL3A8MV65 326 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 TTC38Q5R3I4 469 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 AOPEPQ8N6M6 819 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 BARHL2Q9NY43 387 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 IGKV6D-41A0A0C4DH26 115 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 BIN1O00499 593 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 TTLL1O95922 423 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 DAGLBQ8NCG7 672 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
CMTM3-202ENST00000424011 CCDC34Q96HJ3 373 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 MTMR7Q9Y216 660 aa18.86■□□□□ 0.61
CMTM3-202ENST00000424011 CYTH3O43739 400 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 ASPRV1Q53RT3 343 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 CNNM3Q8NE01 707 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 VPS33BQ9H267 617 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 SEC63Q9UGP8 760 aaKnown RBP18.85■□□□□ 0.61
CMTM3-202ENST00000424011 AKR1B1P15121 316 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 EARS2Q5JPH6 523 aaKnown RBP18.85■□□□□ 0.61
CMTM3-202ENST00000424011 KRBA2Q6ZNG9 492 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 PIK3AP1Q6ZUJ8 805 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 HEATR3Q7Z4Q2 680 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 PI4KBQ9UBF8 816 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 CLIP2Q9UDT6 1046 aa18.85■□□□□ 0.61
CMTM3-202ENST00000424011 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
CMTM3-202ENST00000424011 CDK11BP21127 795 aaKnown RBP18.84■□□□□ 0.61
CMTM3-202ENST00000424011 CDC25BP30305 580 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms