RNA–Protein interactions for RNA: ENST00000421836.6

SPOCK3-203, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPOCK3, Length 3,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-203ENST00000421836 C16orf86Q6ZW13 317 aa14.37□□□□□ -0.11
SPOCK3-203ENST00000421836 ANKRD23Q86SG2 305 aa14.37□□□□□ -0.11
SPOCK3-203ENST00000421836 ITFG2Q969R8 447 aa14.37□□□□□ -0.11
SPOCK3-203ENST00000421836 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
SPOCK3-203ENST00000421836 CENPFP49454 3210 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 USP17L5A8MUK1 530 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 VIL1P09327 827 aaKnown RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 SPATA32Q96LK8 384 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 LLPHQ9BRT6 129 aaKnown RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 ZNF541Q9H0D2 1346 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 SPDYE2BA6NHP3 402 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 SPDYE6P0CI01 402 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 TAL1P17542 331 aaPredicted RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 MARCKSP29966 332 aaPredicted RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 RESTQ13127 1097 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 RRP1BQ14684 758 aaKnown RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 KCTD1Q719H9 257 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 MICALL2Q8IY33 904 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 TRIM22Q8IYM9 498 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 PRPF38AQ8NAV1 312 aaKnown RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 NUP88Q99567 741 aaPredicted RBP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 SYT17Q9BSW7 474 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 GOLGA6AQ9NYA3 693 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 CD2APQ9Y5K6 639 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 LTBP1Q14766 1721 aa14.36□□□□□ -0.11
SPOCK3-203ENST00000421836 WNT10BO00744 389 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 SHMT1P34896 483 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 SEPT2Q15019 361 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 ZNF710Q8N1W2 664 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 FBXO18Q8NFZ0 1043 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 ZNF70Q9UC06 446 aaPredicted RBP14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 HDAC9Q9UKV0 1011 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 LRRC37AA6NMS7 1700 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 TRIM29Q14134 588 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 MFSD4BQ5TF39 518 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 RASGRP4Q8TDF6 673 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 UIMC1Q96RL1 719 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 TMEM63CQ9P1W3 806 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 SERPINA10Q9UK55 444 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 CLIC4Q9Y696 253 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 GOLGA6L4A6NEF3 574 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 KRT85P78386 507 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 ICE2Q659A1 982 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 TTBK2Q6IQ55 1244 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 ERCC4Q92889 916 aaPredicted RBP14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 SHISA4Q96DD7 197 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 TMOD2Q9NZR1 351 aa14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 CNOT7Q9UIV1 285 aaKnown RBP14.35□□□□□ -0.11
SPOCK3-203ENST00000421836 SNED1Q8TER0 1413 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 SYCE3A1L190 88 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 DDNO94850 711 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 FGRP09769 529 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 GYS2P54840 703 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 SF3A1Q15459 793 aaKnown RBP14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 CERKLQ49MI3 558 aaPredicted RBP14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 GH2P01242 217 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 PPP2R5AQ15172 486 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 SPECC1Q5M775 1068 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 MYOZ2Q9NPC6 264 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 ATP6V1DQ9Y5K8 247 aa14.34□□□□□ -0.11
SPOCK3-203ENST00000421836 CDKL5O76039 1030 aa14.33□□□□□ -0.11
SPOCK3-203ENST00000421836 YBX3P16989 372 aaKnown RBP eCLIP14.33□□□□□ -0.11
SPOCK3-203ENST00000421836 IFNAR1P17181 557 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 DGKZQ13574 1117 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 SLC35G1Q2M3R5 365 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 GAS2L3Q86XJ1 694 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 FBXL16Q8N461 479 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 BICD2Q8TD16 824 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 WDR19Q8NEZ3 1342 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 A0A087WWV3 80 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 ME1P48163 572 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 IKQ13123 557 aaPredicted RBP14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 HEATR3Q7Z4Q2 680 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 DIS3L2Q8IYB7 885 aaKnown RBP14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 GMLQ99445 158 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 PI4KBQ9UBF8 816 aa14.33□□□□□ -0.12
SPOCK3-203ENST00000421836 KLRF2D3W0D1 207 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 FMNL1O95466 1100 aaPredicted RBP14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 EPS15P42566 896 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 EARS2Q5JPH6 523 aaKnown RBP14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 RNF214Q8ND24 703 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 LEO1Q8WVC0 666 aaPredicted RBP14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 RBM28Q9NW13 759 aaKnown RBP14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 RNF181Q9P0P0 153 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 CALCOCO1Q9P1Z2 691 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 CYTH3O43739 400 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 LIG1P18858 919 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 SOGA3Q5TF21 947 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 MICALL1Q8N3F8 863 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 NEDD1Q8NHV4 660 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 KDM4CQ9H3R0 1056 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 ZNF287Q9HBT7 754 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 CABP5Q9NP86 173 aa14.32□□□□□ -0.12
SPOCK3-203ENST00000421836 CCDC196A0A1B0GTZ2 297 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms