RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 PCSK9Q8NBP7 692 aaKnown RBP11.17□□□□□ -0.62
TRIM39-206ENST00000420746 TINF2Q9BSI4 451 aa11.17□□□□□ -0.62
TRIM39-206ENST00000420746 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
TRIM39-206ENST00000420746 HOXC10Q9NYD6 342 aa11.17□□□□□ -0.62
TRIM39-206ENST00000420746 EPOPA6NHQ4 379 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 CA3P07451 260 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 SSTR3P32745 418 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-206ENST00000420746 CYP2C18P33260 490 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 PUS10Q3MIT2 529 aaKnown RBP11.16□□□□□ -0.62
TRIM39-206ENST00000420746 SLC4A10Q6U841 1118 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 ATF7IPQ6VMQ6 1270 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 RPUSD2Q8IZ73 545 aaKnown RBP11.16□□□□□ -0.62
TRIM39-206ENST00000420746 NSUN4Q96CB9 384 aaKnown RBP11.16□□□□□ -0.62
TRIM39-206ENST00000420746 PHOX2BQ99453 314 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 HIPK3Q9H422 1215 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 RPAP3Q9H6T3 665 aaPredicted RBP11.16□□□□□ -0.62
TRIM39-206ENST00000420746 CEP126Q9P2H0 1117 aa11.16□□□□□ -0.62
TRIM39-206ENST00000420746 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-206ENST00000420746 GH2P01242 217 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 PFKMP08237 780 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 FCER1AP12319 257 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 PLCG2P16885 1265 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 COG2Q14746 738 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 ZYXQ15942 572 aaKnown RBP11.15□□□□□ -0.62
TRIM39-206ENST00000420746 KRT40Q6A162 431 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 HFE2Q6ZVN8 426 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 MSL3Q8N5Y2 521 aaKnown RBP11.15□□□□□ -0.62
TRIM39-206ENST00000420746 SEZ6LQ9BYH1 1024 aa11.15□□□□□ -0.62
TRIM39-206ENST00000420746 UBE2ZQ9H832 354 aaPredicted RBP11.15□□□□□ -0.62
TRIM39-206ENST00000420746 FANCIQ9NVI1 1328 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 LPXNO60711 386 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 DUSP11O75319 330 aaKnown RBP11.14□□□□□ -0.63
TRIM39-206ENST00000420746 HLA-DOAP06340 250 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 ASGR1P07306 291 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 TAP1Q03518 808 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 GRB10Q13322 594 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 PKN1Q16512 942 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 SAMD1Q6SPF0 538 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-206ENST00000420746 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.14□□□□□ -0.63
TRIM39-206ENST00000420746 PHOSPHO2Q8TCD6 241 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 SLC9A7Q96T83 725 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 FAM184BQ9ULE4 1060 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 CNPY2Q9Y2B0 182 aa11.14□□□□□ -0.63
TRIM39-206ENST00000420746 FLT1P17948 1338 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 GFRA3O60609 400 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 SLC25A27O95847 323 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 TAL1P17542 331 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-206ENST00000420746 TATDN1Q6P1N9 297 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 WWC1Q8IX03 1113 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 SLC43A3Q8NBI5 491 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 PRSS33Q8NF86 280 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 SH3RF3Q8TEJ3 882 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-206ENST00000420746 ARNTL2Q8WYA1 636 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 LENG1Q96BZ8 264 aaPredicted RBP11.13□□□□□ -0.63
TRIM39-206ENST00000420746 NOL10Q9BSC4 688 aaKnown RBP11.13□□□□□ -0.63
TRIM39-206ENST00000420746 SPC25Q9HBM1 224 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 SMCHD1A6NHR9 2005 aa11.13□□□□□ -0.63
TRIM39-206ENST00000420746 ZNF536O15090 1300 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 GRXCR2A6NFK2 248 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 ZBBXA8MT70 800 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 BAG3O95817 575 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 IL9P15248 144 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 PPP4CP60510 307 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 NKX3-2P78367 333 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 ZNF792Q3KQV3 632 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 PTCRAQ6ISU1 281 aaPredicted RBP11.12□□□□□ -0.63
TRIM39-206ENST00000420746 BMP8AQ7Z5Y6 402 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 NCAPG2Q86XI2 1143 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 VTI1AQ96AJ9 217 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 NOC4LQ9BVI4 516 aaKnown RBP11.12□□□□□ -0.63
TRIM39-206ENST00000420746 UPF3AQ9H1J1 476 aaKnown RBP11.12□□□□□ -0.63
TRIM39-206ENST00000420746 CERS4Q9HA82 394 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 PRKAG3Q9UGI9 489 aa11.12□□□□□ -0.63
TRIM39-206ENST00000420746 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 BRWD1Q9NSI6 2320 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 MYADML2A6NDP7 307 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 IGSF3O75054 1194 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 ADORA1P30542 326 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 IL15P40933 162 aaPredicted RBP11.11□□□□□ -0.63
TRIM39-206ENST00000420746 GJA9P57773 515 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 ACER1Q8TDN7 264 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 MMP19Q99542 508 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 UPF3BQ9BZI7 483 aaKnown RBP11.11□□□□□ -0.63
TRIM39-206ENST00000420746 WNT8AQ9H1J5 351 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 TRIOO75962 3097 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 SPTBN4Q9H254 2564 aa11.11□□□□□ -0.63
TRIM39-206ENST00000420746 C19orf67A6NJJ6 358 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 KIF28PB7ZC32 967 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 CABYRO75952 493 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 C6orf222P0C671 652 aaPredicted RBP11.1□□□□□ -0.63
TRIM39-206ENST00000420746 ACTN1P12814 892 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 KCNA5P22460 613 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 DSG3P32926 999 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 COPB2P35606 906 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 CCL23P55773 120 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 MVPQ14764 893 aaKnown RBP11.1□□□□□ -0.63
TRIM39-206ENST00000420746 RAB3GAP1Q15042 981 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 MAMDC4Q6UXC1 1216 aa11.1□□□□□ -0.63
TRIM39-206ENST00000420746 MAPKAPK5Q8IW41 473 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms