RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 MAGEF1Q9HAY2 307 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SEC63Q9UGP8 760 aaKnown RBP16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 M0R2N6 131 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 KIF2AO00139 706 aaPredicted RBP16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TUBB4AP04350 444 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 HLA-DOAP06340 250 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GTF2IP78347 998 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ZNF827Q17R98 1081 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PPP1R18Q6NYC8 613 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 COL23A1Q86Y22 540 aaPredicted RBP16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TEKT1Q969V4 418 aa16.56■□□□□ 0.24
HLA-DPA1-242ENST00000419277 BIN1O00499 593 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CCP110O43303 1012 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PTGDRQ13258 359 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PIK3AP1Q6ZUJ8 805 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SH3RF1Q7Z6J0 888 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 RRP36Q96EU6 259 aaKnown RBP16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 AK8Q96MA6 479 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ZNF830Q96NB3 372 aaPredicted RBP16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 DHX36Q9H2U1 1008 aaKnown RBP16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 C6orf50Q9HD87 102 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 RMND1Q9NWS8 449 aa16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 COL2A1P02458 1487 aaPredicted RBP16.55■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ZNF646O15015 1829 aaPredicted RBP16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PSME4Q14997 1843 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 EP400Q96L91 3159 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 USP17L3A6NCW0 530 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 USP17L4A6NCW7 530 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 KLRF2D3W0D1 207 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 DYNC1I1O14576 645 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 APBA3O96018 575 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 USP17L1Q7RTZ2 530 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SYMPKQ92797 1274 aaKnown RBP16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CCDC17Q96LX7 622 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GPR101Q96P66 508 aaPredicted RBP16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CUEDC2Q9H467 287 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SERTAD1Q9UHV2 236 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
HLA-DPA1-242ENST00000419277 G3V3G9 751 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 STXBP3O00186 592 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 MMP10P09238 476 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 HOXA7P31268 230 aaPredicted RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 FANCCQ00597 558 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 DCAF8Q5TAQ9 597 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ERCC4Q92889 916 aaPredicted RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 MAN1B1Q9UKM7 699 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 R3HCC1Q9Y3T6 440 aaKnown RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 BAZ2BQ9UIF8 2168 aaKnown RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SNHG28P0DPA3 235 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SFPQP23246 707 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 EVX2Q03828 476 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 STRIP1Q5VSL9 837 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 WWC2Q6AWC2 1192 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ZDHHC15Q96MV8 337 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 XPO4Q9C0E2 1151 aaKnown RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GLT8D2Q9H1C3 349 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SAP30BPQ9UHR5 308 aaKnown RBP16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 PYCARDQ9ULZ3 195 aa16.53■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TTLL1O95922 423 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 ATP2B1P20020 1258 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 EARS2Q5JPH6 523 aaKnown RBP16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 GPATCH4Q5T3I0 446 aaKnown RBP16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 TEX2Q8IWB9 1127 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 STAG2Q8N3U4 1231 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SLC44A5Q8NCS7 719 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 CTAGE1Q96RT6 745 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 RIOX1Q9H6W3 641 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 MTMR4Q9NYA4 1195 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 IFNKQ9P0W0 207 aa16.52■□□□□ 0.24
HLA-DPA1-242ENST00000419277 MYH4Q9Y623 1939 aa16.52■□□□□ 0.23
HLA-DPA1-242ENST00000419277 IGKV6D-41A0A0C4DH26 115 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 VWA3AA6NCI4 1184 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 H0YIN7 160 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SERPINC1P01008 464 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 UBASH3AP57075 661 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 GRIN1Q05586 938 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 SOGA3Q5TF21 947 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 HEATR3Q7Z4Q2 680 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 MTERF4Q7Z6M4 381 aaKnown RBP16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FOXP4Q8IVH2 680 aaPredicted RBP16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 MYRIPQ8NFW9 859 aa16.51■□□□□ 0.23
HLA-DPA1-242ENST00000419277 FAM205CA6NFA0 338 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CYTH3O43739 400 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 NAPAP54920 295 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 ZNF174Q15697 407 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 E2F4Q16254 413 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CCDC144BQ3MJ40 725 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 DTHD1Q6ZMT9 781 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 DHX58Q96C10 678 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PAXBP1Q9Y5B6 917 aa16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
HLA-DPA1-242ENST00000419277 PDHBP11177 359 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms