RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ZNF174Q15697 407 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 ANGEL2Q5VTE6 544 aaKnown RBP15.04■□□□□ -0
TOP3B-202ENST00000398793 ST7Q9NRC1 585 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 RSPH14Q9UHP6 348 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 FAM205AQ6ZU69 1335 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 MKI67P46013 3256 aaKnown RBP15.04■□□□□ -0
TOP3B-202ENST00000398793 LOC102724159A0A0B4J2E5 919 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 PWP2Q15269 919 aaKnown RBP15.04■□□□□ -0
TOP3B-202ENST00000398793 SEC23AQ15436 765 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 SPC24Q8NBT2 197 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 ZKSCAN4Q969J2 545 aaPredicted RBP15.04■□□□□ -0
TOP3B-202ENST00000398793 PIGSQ96S52 555 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 ZNF70Q9UC06 446 aaPredicted RBP15.04■□□□□ -0
TOP3B-202ENST00000398793 ZMYM6O95789 1325 aa15.04■□□□□ -0
TOP3B-202ENST00000398793 PLCG2P16885 1265 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 JAKMIP3Q5VZ66 844 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 MYOZ2Q9NPC6 264 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 EEF2P13639 858 aaKnown RBP15.03■□□□□ -0
TOP3B-202ENST00000398793 UBXN2AP68543 259 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 TROAPQ12815 778 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 NBPF12Q5TAG4 269 aaPredicted RBP15.03■□□□□ -0
TOP3B-202ENST00000398793 SLC30A10Q6XR72 485 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 PIK3AP1Q6ZUJ8 805 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 CPXCR1Q8N123 301 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 MKRN1Q9UHC7 482 aaKnown RBP15.03■□□□□ -0
TOP3B-202ENST00000398793 SCN9AQ15858 1988 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 WNT7AO00755 349 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 RGL2O15211 777 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 RAD51AP2Q09MP3 1159 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 DHX8Q14562 1220 aaKnown RBP15.03■□□□□ -0
TOP3B-202ENST00000398793 HSP90AA4PQ58FG1 418 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 RREB1Q92766 1687 aa15.03■□□□□ -0
TOP3B-202ENST00000398793 SPDYE2BA6NHP3 402 aa15.02■□□□□ -0
TOP3B-202ENST00000398793 SPDYE6P0CI01 402 aa15.02■□□□□ -0
TOP3B-202ENST00000398793 CC2D2BQ6DHV5 1058 aa15.02■□□□□ -0
TOP3B-202ENST00000398793 CCDC125Q86Z20 511 aa15.02■□□□□ -0
TOP3B-202ENST00000398793 MYO1BO43795 1136 aa15.02□□□□□ -0.01
TOP3B-202ENST00000398793 GRIN1Q05586 938 aa15.02□□□□□ -0.01
TOP3B-202ENST00000398793 FBXO18Q8NFZ0 1043 aa15.02□□□□□ -0.01
TOP3B-202ENST00000398793 FBXO28Q9NVF7 368 aa15.02□□□□□ -0.01
TOP3B-202ENST00000398793 DACT1Q9NYF0 836 aa15.02□□□□□ -0.01
TOP3B-202ENST00000398793 MCM7P33993 719 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 SHMT1P34896 483 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 PPP4CP60510 307 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 TGFB2P61812 414 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 NTRK3Q16288 839 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 UVSSAQ2YD98 709 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 C9orf131Q5VYM1 1079 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 CCDC174Q6PII3 467 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 C16orf45Q96MC5 204 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 EFCC1Q9HA90 598 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 BIN2Q9UBW5 565 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 TRIM75PA6NK02 468 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 INPP5BP32019 993 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 SHISA4Q96DD7 197 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 KCNF1Q9H3M0 494 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 GEMIN8Q9NWZ8 242 aaKnown RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 GGA3Q9NZ52 723 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 HACL1Q9UJ83 578 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 COL4A5P29400 1685 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 ICA1Q05084 483 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 LEO1Q8WVC0 666 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 KIFC2Q96AC6 838 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 ZDHHC15Q96MV8 337 aa15.01□□□□□ -0.01
TOP3B-202ENST00000398793 COL11A2P13942 1736 aaPredicted RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 TNS1Q9HBL0 1735 aaKnown RBP15.01□□□□□ -0.01
TOP3B-202ENST00000398793 EPB41L2O43491 1005 aaKnown RBP15□□□□□ -0.01
TOP3B-202ENST00000398793 CYTH3O43739 400 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 SORBS3O60504 671 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 NR1I2O75469 434 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 POTEIP0CG38 1075 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 POTEJP0CG39 1038 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 HMGB2P26583 209 aaKnown RBP15□□□□□ -0.01
TOP3B-202ENST00000398793 SLC1A4P43007 532 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 SAFBQ15424 915 aaKnown RBP eCLIP15□□□□□ -0.01
TOP3B-202ENST00000398793 UBE2SQ16763 222 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 ABCB5Q2M3G0 1257 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 GNL3Q9BVP2 549 aaKnown RBP eCLIP15□□□□□ -0.01
TOP3B-202ENST00000398793 YY1AP1Q9H869 796 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 GTF2A1P52655 376 aaPredicted RBP15□□□□□ -0.01
TOP3B-202ENST00000398793 RESTQ13127 1097 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 SLC35G1Q2M3R5 365 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 TMEM260Q9NX78 707 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 PCDHB6Q9Y5E3 794 aa15□□□□□ -0.01
TOP3B-202ENST00000398793 USP17L10C9JJH3 530 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 PARP1P09874 1014 aaKnown RBP14.99□□□□□ -0.01
TOP3B-202ENST00000398793 LIFRP42702 1097 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 PSEN1P49768 467 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 MMP14P50281 582 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 NAPAP54920 295 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 ADAMTSL1Q8N6G6 1762 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 C16orf86Q6ZW13 317 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 CREBRFQ8IUR6 639 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 SMARCC2Q8TAQ2 1214 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 PI4KBQ9UBF8 816 aa14.99□□□□□ -0.01
TOP3B-202ENST00000398793 GAKO14976 1311 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms