RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 HMGCS2P54868 508 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 RRP1BQ14684 758 aaKnown RBP9.95□□□□□ -0.82
HERC4-203ENST00000395185 ANKRD1Q15327 319 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 SEC23AQ15436 765 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 GPAT2Q6NUI2 795 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 TMEM179Q6ZVK1 233 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 SGMS1Q86VZ5 419 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 DYNLL2Q96FJ2 89 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 ABHD8Q96I13 439 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 TMEM87BQ96K49 555 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
HERC4-203ENST00000395185 SH2D4AQ9H788 454 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 DNAJC18Q9H819 358 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 STK24Q9Y6E0 443 aa9.95□□□□□ -0.82
HERC4-203ENST00000395185 PCNTO95613 3336 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 IGKV6D-41A0A0C4DH26 115 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 POTEB2H3BUK9 544 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 SH2B2O14492 632 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 PRC1O43663 620 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 KDM4AO75164 1064 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 FMNL1O95466 1100 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 SHMT1P34896 483 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 PRMT2P55345 433 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 IRX3P78415 501 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 PDE4BQ07343 736 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 TRDNQ13061 729 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 MTMR2Q13614 643 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 BECN1Q14457 450 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 FBXO46Q6PJ61 603 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 C17orf99Q6UX52 265 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 Q6ZUG5 572 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 NBPF11Q86T75 865 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 CCDC84Q86UT8 332 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 CCAR1Q8IX12 1150 aaKnown RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 NEDD1Q8NHV4 660 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 ESR2Q92731 530 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 ZNF274Q96GC6 653 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 TMX3Q96JJ7 454 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 ZSCAN31Q96LW9 406 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 TCEANC2Q96MN5 208 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 KANSL2Q9H9L4 492 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 ARHGEF10LQ9HCE6 1279 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 GPHNQ9NQX3 736 aaPredicted RBP9.94□□□□□ -0.82
HERC4-203ENST00000395185 IL17RBQ9NRM6 502 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 CPA4Q9UI42 421 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 TPCN1Q9ULQ1 816 aa9.94□□□□□ -0.82
HERC4-203ENST00000395185 USP17L15C9J2P7 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L13C9JLJ4 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L11C9JVI0 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L18D6R9N7 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L22D6RA61 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L17D6RBQ6 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L19D6RCP7 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L20D6RJB6 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 CYP2C8P10632 490 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 HOXA7P31268 230 aaPredicted RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 DDIT3P35638 169 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 FCGRTP55899 365 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 USP17L24Q0WX57 530 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 ST3GAL1Q11201 340 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 MOGSQ13724 837 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 ME3Q16798 604 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 PPP4R3BQ5MIZ7 849 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 RCSD1Q6JBY9 416 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 RALYLQ86SE5 291 aaKnown RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 DGKHQ86XP1 1220 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 TMTC2Q8N394 836 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 EFCAB3Q8N7B9 438 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 SLC44A5Q8NCS7 719 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 CD99L2Q8TCZ2 262 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 GTF3C2Q8WUA4 911 aaPredicted RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 INTS4Q96HW7 963 aaKnown RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 KIAA1683Q9H0B3 1180 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 LY9Q9HBG7 655 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 SH2B1Q9NRF2 756 aaPredicted RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 BRPF3Q9ULD4 1205 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 HPS5Q9UPZ3 1129 aa9.93□□□□□ -0.82
HERC4-203ENST00000395185 DDX60LQ5H9U9 1706 aaKnown RBP9.93□□□□□ -0.82
HERC4-203ENST00000395185 PLIN4Q96Q06 1357 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 PFKFB2O60825 505 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 PRDM1O75626 825 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 PDIA3P30101 505 aaKnown RBP9.92□□□□□ -0.82
HERC4-203ENST00000395185 PSMC4P43686 418 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 RCAN1P53805 252 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 LACTBP83111 547 aaPredicted RBP9.92□□□□□ -0.82
HERC4-203ENST00000395185 ATP2B2Q01814 1243 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 SEPT2Q15019 361 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 CHST3Q7LGC8 479 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 OTOP1Q7RTM1 612 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 HSCBQ8IWL3 235 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 ZSCAN10Q96SZ4 725 aaPredicted RBP9.92□□□□□ -0.82
HERC4-203ENST00000395185 SENP2Q9HC62 589 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 HOXC10Q9NYD6 342 aa9.92□□□□□ -0.82
HERC4-203ENST00000395185 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
HERC4-203ENST00000395185 LARGE1O95461 756 aa9.91□□□□□ -0.82
HERC4-203ENST00000395185 JAG1P78504 1218 aa9.91□□□□□ -0.82
HERC4-203ENST00000395185 TFAP4Q01664 338 aa9.91□□□□□ -0.82
HERC4-203ENST00000395185 CCDC178Q5BJE1 867 aa9.91□□□□□ -0.82
HERC4-203ENST00000395185 TREML2Q5T2D2 321 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms