RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 RBL2Q08999 1139 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 SKIDA1Q1XH10 827 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 ZNF34Q8IZ26 560 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 AENQ8WTP8 325 aaKnown RBP21.16■□□□□ 0.98
HOXC6-202ENST00000394331 TRIM6Q9C030 488 aaPredicted RBP21.16■□□□□ 0.98
HOXC6-202ENST00000394331 FAM184BQ9ULE4 1060 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 DISP2A7MBM2 1401 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 MYH7P12883 1935 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 SRRM3A6NNA2 597 aaPredicted RBP21.16■□□□□ 0.98
HOXC6-202ENST00000394331 NCAPH2Q6IBW4 605 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 CYB5R4Q7L1T6 521 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 STRBPQ96SI9 672 aaKnown RBP21.16■□□□□ 0.98
HOXC6-202ENST00000394331 ALG1Q9BT22 464 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 WWC3Q9ULE0 1092 aa21.16■□□□□ 0.98
HOXC6-202ENST00000394331 A0A1B0GUA9 196 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 TCRBV5S4A2TA0A5A2 114 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 NDUFAB1O14561 156 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 TFRCP02786 760 aaKnown RBP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 FGFR2P21802 821 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 APTXQ7Z2E3 356 aaKnown RBP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 RNF217Q8TC41 542 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 AKAP11Q9UKA4 1901 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 DDX60Q8IY21 1712 aaKnown RBP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 SLC5A1P13866 664 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 FMR1Q06787 632 aaKnown RBP eCLIP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 ZKSCAN8Q15776 578 aaPredicted RBP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 APOA5Q6Q788 366 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.15■□□□□ 0.98
HOXC6-202ENST00000394331 KIF28PB7ZC32 967 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 EMC10Q5UCC4 262 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 MAN1B1Q9UKM7 699 aa21.15■□□□□ 0.98
HOXC6-202ENST00000394331 SARSP49591 514 aaKnown RBP21.14■□□□□ 0.97
HOXC6-202ENST00000394331 MAP3K12Q12852 859 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 PTPAQ15257 358 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 CEP85LQ5SZL2 805 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 GJB4Q9NTQ9 266 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 B4E1Z4 1266 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 SEMA3EO15041 775 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 MORC3Q14149 939 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 CCDC40Q4G0X9 1142 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 PAPD7Q5XG87 772 aaKnown RBP21.14■□□□□ 0.97
HOXC6-202ENST00000394331 CTAGE1Q96RT6 745 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 EHD4Q9H223 541 aa21.14■□□□□ 0.97
HOXC6-202ENST00000394331 ZBTB43O43298 467 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 NEBLO76041 1014 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 SGMS1Q86VZ5 419 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 SPATA5Q8NB90 893 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 UBN2Q6ZU65 1347 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 IGDCC4Q8TDY8 1250 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 ITGB4P16144 1822 aa21.13■□□□□ 0.97
HOXC6-202ENST00000394331 PLCD1P51178 756 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 NAP1L1P55209 391 aaKnown RBP21.12■□□□□ 0.97
HOXC6-202ENST00000394331 GRIK3Q13003 919 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 NFXL1Q6ZNB6 911 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 DENND2AQ9ULE3 1009 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 SAMM50Q9Y512 469 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 ANKRD33BA6NCL7 494 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 LIFRP42702 1097 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 ALS2CLQ60I27 953 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 KRT40Q6A162 431 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 NAPBQ9H115 298 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 ATP6V0A4Q9HBG4 840 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 BSDC1Q9NW68 430 aaPredicted RBP21.12■□□□□ 0.97
HOXC6-202ENST00000394331 KCNH3Q9ULD8 1083 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 ANKRD36CQ5JPF3 1778 aa21.12■□□□□ 0.97
HOXC6-202ENST00000394331 CLSTN1O94985 981 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 PAX7P23759 505 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 SLC8A3P57103 927 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 ICA1Q05084 483 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 TRIM29Q14134 588 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 VPS37DQ86XT2 251 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 CNNM2Q9H8M5 875 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 ACTR5Q9H9F9 607 aaPredicted RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 NHSL1Q5SYE7 1610 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 MARCKSP29966 332 aaPredicted RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 IARSP41252 1262 aaKnown RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 SARNPP82979 210 aaKnown RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 TMEM67Q5HYA8 995 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 IQCEQ6IPM2 695 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 TLDC1Q6P9B6 456 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 CYP26C1Q6V0L0 522 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 MICU3Q86XE3 530 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 ACRBPQ8NEB7 543 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 HELBQ8NG08 1087 aaPredicted RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 ADD3Q9UEY8 706 aaKnown RBP21.11■□□□□ 0.97
HOXC6-202ENST00000394331 MYH3P11055 1940 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 ZNF662Q6ZS27 426 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 IFNL3Q8IZI9 196 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 SAR1BQ9Y6B6 198 aa21.11■□□□□ 0.97
HOXC6-202ENST00000394331 GOLGA8AA7E2F4 631 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 MMS19Q96T76 1030 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 MAP3K14Q99558 947 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 LY9Q9HBG7 655 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 C4AP0C0L4 1744 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 C4BP0C0L5 1744 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 CDR1P51861 262 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 POSTNQ15063 836 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 SNCBQ16143 134 aa21.1■□□□□ 0.97
HOXC6-202ENST00000394331 MAGEB6Q8N7X4 407 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms