RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 RIOX2Q8IUF8 465 aa20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 CLEC10AQ8IUN9 316 aa20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 STRBPQ96SI9 672 aaKnown RBP20.99■□□□□ 0.95
SNRPA1-202ENST00000394082 A0A0C4DFX4 3053 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 SMIM22K7EJ46 135 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 CHGBP05060 677 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 KBTBD3Q8NAB2 608 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 BCL11AQ9H165 835 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 PPP1R9AQ9ULJ8 1098 aa20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 GREB1LQ9C091 1923 aaPredicted RBP20.98■□□□□ 0.95
SNRPA1-202ENST00000394082 ROBO3Q96MS0 1386 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 VWA5AO00534 786 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 ZFYP08048 801 aaPredicted RBP20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 SNX17Q15036 470 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 C1orf53Q5VUE5 145 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 GPATCH3Q96I76 525 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 DCTPP1Q9H773 170 aa20.97■□□□□ 0.95
SNRPA1-202ENST00000394082 GSG1L2A8MUP6 293 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 KBTBD13C9JR72 458 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 C20orf194Q5TEA3 1177 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 DEFB123Q8N688 67 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 APPBP2Q92624 585 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 LBHD1Q9BQE6 289 aaPredicted RBP20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 NYAP2Q9P242 653 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 ZNF214Q9UL59 606 aaPredicted RBP20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 SYNPO2Q9UMS6 1093 aa20.96■□□□□ 0.95
SNRPA1-202ENST00000394082 GNAT2P19087 354 aa20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 STAT3P40763 770 aa20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 MDM2Q00987 491 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 SLC39A5Q6ZMH5 540 aa20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 REPS2Q8NFH8 660 aa20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 PRKAG2Q9UGJ0 569 aa20.95■□□□□ 0.94
SNRPA1-202ENST00000394082 ZNFX1Q9P2E3 1918 aaKnown RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 SMARCA5O60264 1052 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 RASA1P20936 1047 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 RTP1P59025 263 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 KCTD2Q14681 263 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 ZNF792Q3KQV3 632 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 GJC2Q5T442 439 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 FAM109BQ6ICB4 259 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 MSL3Q8N5Y2 521 aaKnown RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 MMP19Q99542 508 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 ZNF287Q9HBT7 754 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 FBXO28Q9NVF7 368 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 STXBP5LQ9Y2K9 1186 aa20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
SNRPA1-202ENST00000394082 ATP2A1O14983 1001 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 ATN1P54259 1190 aaPredicted RBP20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 FAM83BQ5T0W9 1011 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 SLC17A8Q8NDX2 589 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 OSBP2Q969R2 916 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 TINF2Q9BSI4 451 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 MKNK2Q9HBH9 465 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 MTMR10Q9NXD2 777 aa20.93■□□□□ 0.94
SNRPA1-202ENST00000394082 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-202ENST00000394082 LRRC41Q15345 812 aa20.92■□□□□ 0.94
SNRPA1-202ENST00000394082 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.92■□□□□ 0.94
SNRPA1-202ENST00000394082 MKL1Q969V6 931 aa20.92■□□□□ 0.94
SNRPA1-202ENST00000394082 TEX13BQ9BXU2 312 aa20.92■□□□□ 0.94
SNRPA1-202ENST00000394082 IGKV6D-41A0A0C4DH26 115 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 F5H6K3 240 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 POTEB2H3BUK9 544 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 KLRC3Q07444 240 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 PRAMEF19Q5SWL8 479 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 PRPF38AQ8NAV1 312 aaKnown RBP20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 SLF1Q9BQI6 1058 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 PHF24Q9UPV7 400 aa20.91■□□□□ 0.94
SNRPA1-202ENST00000394082 LTBP2Q14767 1821 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 TTC41PQ6P2S7 1318 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 GPAA1O43292 621 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 RARBP10826 455 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 FAM47AQ5JRC9 791 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 ATP11BQ9Y2G3 1177 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 PLXNA1Q9UIW2 1896 aa20.9■□□□□ 0.94
SNRPA1-202ENST00000394082 PATL2C9JE40 543 aaKnown RBP20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 NDUFB10O96000 172 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 PGK2P07205 417 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 ADCYAP1R1P41586 468 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 ANO1Q5XXA6 986 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 SAMD1Q6SPF0 538 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 MAMDC4Q6UXC1 1216 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 RNF180Q86T96 592 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 EPB41L4AQ9HCS5 686 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 XPNPEP3Q9NQH7 507 aa20.89■□□□□ 0.93
SNRPA1-202ENST00000394082 SYNGAP1Q96PV0 1343 aa20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 DNAJC25-GNG10A0A024R161 153 aa20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 MINDY4BA8MYZ0 360 aa20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 ZNF865P0CJ78 1059 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 AKR1A1P14550 325 aa20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 Q7L0L9 218 aa20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 ZNF467Q7Z7K2 595 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 ZNF444Q8N0Y2 327 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-202ENST00000394082 PLIN4Q96Q06 1357 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 SMCHD1A6NHR9 2005 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 ERC2O15083 957 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 FDX1P10109 184 aa20.87■□□□□ 0.93
SNRPA1-202ENST00000394082 TDO2P48775 406 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms