RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 DYDC1Q8WWB3 177 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 DNM3Q9UQ16 869 aa14.75□□□□□ -0.05
NPHP4-203ENST00000378169 RPS6KA4O75676 772 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 OR52Z1P0C646 297 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 SLC16A2P36021 539 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 PRR16Q569H4 304 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 GTPBP4Q9BZE4 634 aaKnown RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 RIPOR2Q9Y4F9 1068 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 DCAF8L1A6NGE4 600 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 TMEM110-MUSTN1A8MSY1 372 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 ICA1Q05084 483 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 KIAA0753Q2KHM9 967 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 CPVLQ9H3G5 476 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 PCP11498 1178 aaKnown RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 HARSP12081 509 aaKnown RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 CYP26C1Q6V0L0 522 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 CEP170BQ9Y4F5 1589 aaPredicted RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 CD163L1Q9NR16 1453 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 PPP6R2O75170 966 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 PAXIP1Q6ZW49 1069 aaPredicted RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 EPSTI1Q96J88 318 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 NAP1L4Q99733 375 aaKnown RBP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 SLC39A2Q9NP94 309 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 PCDHA1Q9Y5I3 950 aa14.74□□□□□ -0.05
NPHP4-203ENST00000378169 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.74□□□□□ -0.05
NPHP4-203ENST00000378169 KIAA1210Q9ULL0 1709 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 VWDEQ8N2E2 1590 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 CLRN2A0PK11 232 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 CCDC169A6NNP5 214 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 GJC1P36383 396 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 PPP1R2P41236 205 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 SLC44A5Q8NCS7 719 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 KAZALD1Q96I82 304 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 THRAP3Q9Y2W1 955 aaKnown RBP14.73□□□□□ -0.05
NPHP4-203ENST00000378169 PPEF1O14829 653 aaPredicted RBP14.73□□□□□ -0.05
NPHP4-203ENST00000378169 NMT2O60551 498 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 BBOX1O75936 387 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 TMTC1Q8IUR5 882 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 GLT8D2Q9H1C3 349 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 SERPINB13Q9UIV8 391 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 TECPR2O15040 1411 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 ARHGEF35A5YM69 484 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 KCTD1Q719H9 257 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 USP37Q86T82 979 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 TPH2Q8IWU9 490 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 RDH13Q8NBN7 331 aa14.73□□□□□ -0.05
NPHP4-203ENST00000378169 DESP17661 470 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 CDC27P30260 824 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 CYP4A11Q02928 519 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 SLFN13Q68D06 897 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 MB21D2Q8IYB1 491 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-203ENST00000378169 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.72□□□□□ -0.05
NPHP4-203ENST00000378169 CDHR2Q9BYE9 1310 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 KCNJ18B7U540 433 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 WDHD1O75717 1129 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-203ENST00000378169 ATP1A3P13637 1013 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 GRAPQ13588 217 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 MORC3Q14149 939 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 KCNJ12Q14500 433 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 GRAPLQ8TC17 118 aaPredicted RBP14.72□□□□□ -0.05
NPHP4-203ENST00000378169 IFT81Q8WYA0 676 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 COA7Q96BR5 231 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 NARFQ9UHQ1 456 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 COL15A1P39059 1388 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 GCNT3O95395 438 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 EPB41P11171 864 aaKnown RBP14.72□□□□□ -0.05
NPHP4-203ENST00000378169 NIM1KQ8IY84 436 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 FRMD4BQ9Y2L6 1034 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 DIP2AQ14689 1571 aa14.72□□□□□ -0.05
NPHP4-203ENST00000378169 A0A0G2JLW4 131 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 TMEM232C9JQI7 657 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 TRIM14Q14142 442 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 MYCT1Q8N699 235 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 TMEM87AQ8NBN3 555 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 ARHGEF1Q92888 912 aaKnown RBP14.71□□□□□ -0.05
NPHP4-203ENST00000378169 PIGSQ96S52 555 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 NAPGQ99747 312 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-203ENST00000378169 PCDHB13Q9Y5F0 798 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 SHTN1A0MZ66 631 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 CACNB3P54284 484 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 KRT27Q7Z3Y8 459 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 BCL2L12Q9HB09 334 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 ZNF215Q9UL58 517 aaPredicted RBP14.71□□□□□ -0.05
NPHP4-203ENST00000378169 GSG1L2A8MUP6 293 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 MAGEA1P43355 309 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 RRAGAQ7L523 313 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 MRPL44Q9H9J2 332 aaKnown RBP14.71□□□□□ -0.05
NPHP4-203ENST00000378169 PICK1Q9NRD5 415 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 PREX1Q8TCU6 1659 aa14.71□□□□□ -0.05
NPHP4-203ENST00000378169 MROH1Q8NDA8 1641 aa14.71□□□□□ -0.06
NPHP4-203ENST00000378169 GTPBP6O43824 516 aaPredicted RBP14.71□□□□□ -0.06
NPHP4-203ENST00000378169 GDF11O95390 407 aa14.71□□□□□ -0.06
NPHP4-203ENST00000378169 RPN1P04843 607 aaKnown RBP14.71□□□□□ -0.06
NPHP4-203ENST00000378169 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.06
NPHP4-203ENST00000378169 SPATA1Q5VX52 437 aa14.71□□□□□ -0.06
NPHP4-203ENST00000378169 JAKMIP2Q96AA8 810 aa14.71□□□□□ -0.06
NPHP4-203ENST00000378169 SELENOOQ9BVL4 669 aa14.71□□□□□ -0.06
NPHP4-203ENST00000378169 ZNF609O15014 1411 aa14.7□□□□□ -0.06
NPHP4-203ENST00000378169 DNAJC21Q5F1R6 531 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms