RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 CCND3P30281 292 aaPredicted RBP18.08■□□□□ 0.48
SS18L1-202ENST00000370848 CDK8P49336 464 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 COG2Q14746 738 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 SBK1Q52WX2 424 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 GIMAP6Q6P9H5 292 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 C16orf86Q6ZW13 317 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 CLEC10AQ8IUN9 316 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 MB21D1Q8N884 522 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 HOXC10Q9NYD6 342 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 FLRT1Q9NZU1 646 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 TMX2Q9Y320 296 aa18.08■□□□□ 0.48
SS18L1-202ENST00000370848 MPHOSPH10O00566 681 aaKnown RBP18.07■□□□□ 0.48
SS18L1-202ENST00000370848 STRNO43815 780 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 MSCO60682 206 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 MCMDC2Q4G0Z9 681 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 CCAR1Q8IX12 1150 aaKnown RBP18.07■□□□□ 0.48
SS18L1-202ENST00000370848 AMOTL1Q8IY63 956 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 CCDC17Q96LX7 622 aa18.07■□□□□ 0.48
SS18L1-202ENST00000370848 KIAA1755Q5JYT7 1200 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 OLFML2BQ68BL8 750 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 CWC27Q6UX04 472 aaKnown RBP18.06■□□□□ 0.48
SS18L1-202ENST00000370848 ABRAQ8N0Z2 381 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 CCDC136Q96JN2 1154 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 MOV10L1Q9BXT6 1211 aaKnown RBP18.06■□□□□ 0.48
SS18L1-202ENST00000370848 NAPBQ9H115 298 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 IL25Q9H293 177 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 ADAMTS5Q9UNA0 930 aa18.06■□□□□ 0.48
SS18L1-202ENST00000370848 ROBO3Q96MS0 1386 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 CCDC171Q6TFL3 1326 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 CYBAP13498 195 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 MFSD14CQ5VZR4 134 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 C7orf61Q8IZ16 206 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 NACAP1Q9BZK3 213 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 SPATC1LQ9H0A9 340 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 SH2D4AQ9H788 454 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 VCPKMTQ9H867 229 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 DIAPH3Q9NSV4 1193 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 IVNS1ABPQ9Y6Y0 642 aa18.05■□□□□ 0.48
SS18L1-202ENST00000370848 SOX1O00570 391 aaPredicted RBP18.04■□□□□ 0.48
SS18L1-202ENST00000370848 PRDM1O75626 825 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 DSG3P32926 999 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 LRIT3Q3SXY7 679 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 TICAM2Q86XR7 235 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 NPLOC4Q8TAT6 608 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 TACC3Q9Y6A5 838 aa18.04■□□□□ 0.48
SS18L1-202ENST00000370848 WDR46O15213 610 aaKnown RBP18.03■□□□□ 0.48
SS18L1-202ENST00000370848 HSPD1P10809 573 aaKnown RBP18.03■□□□□ 0.48
SS18L1-202ENST00000370848 RASA1P20936 1047 aa18.03■□□□□ 0.48
SS18L1-202ENST00000370848 ICA1Q05084 483 aa18.03■□□□□ 0.48
SS18L1-202ENST00000370848 PPARAQ07869 468 aa18.03■□□□□ 0.48
SS18L1-202ENST00000370848 MROH8Q9H579 483 aa18.03■□□□□ 0.48
SS18L1-202ENST00000370848 ARHGEF10LQ9HCE6 1279 aa18.03■□□□□ 0.48
SS18L1-202ENST00000370848 DDX20Q9UHI6 824 aaKnown RBP18.03■□□□□ 0.48
SS18L1-202ENST00000370848 LAMA2P24043 3122 aaKnown RBP18.03■□□□□ 0.48
SS18L1-202ENST00000370848 COL11A1P12107 1806 aaPredicted RBP18.02■□□□□ 0.48
SS18L1-202ENST00000370848 ADORA2AP29274 412 aa18.02■□□□□ 0.48
SS18L1-202ENST00000370848 CTDSPL2Q05D32 466 aa18.02■□□□□ 0.48
SS18L1-202ENST00000370848 TRPV1Q8NER1 839 aa18.02■□□□□ 0.48
SS18L1-202ENST00000370848 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.02■□□□□ 0.48
SS18L1-202ENST00000370848 INCENPQ9NQS7 918 aa18.02■□□□□ 0.48
SS18L1-202ENST00000370848 LTBP2Q14767 1821 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 DNM1LO00429 736 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 ERCC3P19447 782 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 LRRC26Q2I0M4 334 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 TANGO6Q9C0B7 1094 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 KANSL2Q9H9L4 492 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 MKNK2Q9HBH9 465 aa18.01■□□□□ 0.47
SS18L1-202ENST00000370848 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
SS18L1-202ENST00000370848 HIP1O00291 1037 aa18■□□□□ 0.47
SS18L1-202ENST00000370848 FGAP02671 866 aa18■□□□□ 0.47
SS18L1-202ENST00000370848 MAGEA10P43363 369 aaPredicted RBP18■□□□□ 0.47
SS18L1-202ENST00000370848 ATP2B2Q01814 1243 aa18■□□□□ 0.47
SS18L1-202ENST00000370848 ALX1Q15699 326 aa18■□□□□ 0.47
SS18L1-202ENST00000370848 NRBP1Q9UHY1 535 aa18■□□□□ 0.47
SS18L1-202ENST00000370848 ZMYND8Q9ULU4 1186 aaPredicted RBP18■□□□□ 0.47
SS18L1-202ENST00000370848 COBLO75128 1261 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 CHMLP26374 656 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 CYP2C19P33261 490 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 HAND2P61296 217 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 TDHQ8IZJ6 230 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 ATG4CQ96DT6 458 aa17.99■□□□□ 0.47
SS18L1-202ENST00000370848 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.99■□□□□ 0.47
SS18L1-202ENST00000370848 ZNFX1Q9P2E3 1918 aaKnown RBP17.98■□□□□ 0.47
SS18L1-202ENST00000370848 SEPT4O43236 478 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 FLOT1O75955 427 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 SLC25A27O95847 323 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 EEF2P13639 858 aaKnown RBP17.98■□□□□ 0.47
SS18L1-202ENST00000370848 SNX17Q15036 470 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 FAM47AQ5JRC9 791 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 WDR78Q5VTH9 848 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 REPS2Q8NFH8 660 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 LRCH3Q96II8 777 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 SLC5A4Q9NY91 659 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 ZNF214Q9UL59 606 aaPredicted RBP17.98■□□□□ 0.47
SS18L1-202ENST00000370848 SYNPO2Q9UMS6 1093 aa17.98■□□□□ 0.47
SS18L1-202ENST00000370848 PLXNA1Q9UIW2 1896 aa17.97■□□□□ 0.47
SS18L1-202ENST00000370848 TMEM132BQ14DG7 1078 aa17.97■□□□□ 0.47
SS18L1-202ENST00000370848 C1orf53Q5VUE5 145 aa17.97■□□□□ 0.47
SS18L1-202ENST00000370848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms